Transcript Information: S_Transcript_88448.p1


Annotated TAIR IDAT3G23590.1
Annotated Gene NameREF4-related 1
Annotated Gene Symbol(s)RFR1, MED33A
Annotation TypeOrtholog
Chromosome Positionchr3:8467638-8473469 | Forward length=1309
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.140788229792
Replicate 29.7790646706063
Replicate 311.724700925803
Condition 2: 8 Hour
Replicate 111.873168942609
Replicate 213.714627843307
Replicate 312.835801618005
Condition 3: 24 Hour
Replicate 110.566626762479
Replicate 29.6203741143429
Replicate 39.7850577010964


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88448.p1 GENE.S_Transcript_88448~~S_Transcript_88448.p1 ORF type:complete len:1013 (+),score=178.39 S_Transcript_88448:476-3514(+)
ATGGCCCCTGGATCCTTTGTACCTTCTGCTGCTCAATGGCATGGGGCTAGTTGCTCTGCACTTTGGCTTCCTATTGACCTGTTTCTAGAAGATTCTATGGAGCACATTACAGTTTCTCCGACATGTGCCATTGATACACTTACTGGAATTGTGAAATCACTTCAGGCACTGAACAGTACGACATGGCACGACACCTTCTTAGGTTTGTGGATTGCAACTTTGCGTCTTGTTCAAAGGGAGAGGAATCCTTATGAGGGTCCTGTCGCTCGCCTTGACAGTTGCCTCTGCATGCTGCTATCCATTGTACCTCTTGTGCTTGTTAATCTTATCGAGGAAGAACAATCTACGCTAGACAAGGAGTCTGAGTTTGGTGTAAAGGAGGATAAAGAGATTTATGGAAGTCGTCGCTGTCAGTTGGTTTGCAGTTTACAGTTGTTAGGTGAATATGAAGGGTTGTTAACTCCACCGTCACTTATTGCCCCGTTAGCCAATCAGGCTGCAGTGAAAGCAGTATTGTATCTTTCAGGCTTCAATATTGGCAGTGGTTACCTTGATTCTGTCAACATCAATGATGTGCCGATGAACTGTGCTGGAAATCTGCACCATTTGATTGTTGAAGCTTGCATTGTTAGAAATTTATTGGACATCTCAGCATATATGTGGCCTGGTTATGTGAATGCGCGTGTCAGTCAGATACCTTGTGGTGTTGCTGGACAAGTTACTGGTTGGTCATCATTAATGAAAGGTTCTCCCCTTAGTTCCACAATGGCAAATAGTCTAATTTCCACTCCTGCTTCAAGCTTAGCAGAGATAGAGAAAATCTATGAGATTGCAGTTGGGGGTTCAGATGAAGAGAAGATGCGAGCCGCTACTGTTTTATGTGGGGCATCTCTCGTTCGTGGTTGGAATGTACAGGAGCACGTAGTAGTCTTCATTCTGAGGTTGCTGTCACCTCTCAAGCCTGTGGAATATTCAGGAACTGACAGTCATTTAATTAGTTGTGGACCATTTCTGAATGTCATTCTTGTTGGGATAGCAACGATGGATATTGTTCAGATATTTTCACTCCATGGCTTGATTCCACAGCTTACTGGAGCATTGATGCCCATCTGTGAGGTTTTTGGCTCTTGTTCGCCCAAGGTTTCATGGACACTTTCAACAGGAGAGGAAATAAATGCCCATGCTGTGTTCTCTAATGCATTTACTCTCCTCTTGAAGCTCTGGCGTTTTGATCATACACCCGTTGAACAGTTGGGTGATGTGCCATCGGTAGTTTCACAGCAAAGTCCAGAGTATCTCCTCTTGGTGAGGAACTCTCAACTTGCCAATACAGCAATAGATCAGAATAGGAGCCAAAGGTTTACGAAATTGCTAAGTCCAATGCCAGCAGATCCGATATTTATGGATTCTTTCCCTAAACTGAAATGTTGGTACAGACAACATCAGGCCTGTATTGCTTCTCCACTTTCAGGTCTTACACCGGGCACCCCTGTCCATCAAATTGTTGAGGCTCTATTGACTATGCTCTTCAAGAAAATGAATAGAGGTACAACTTCTGGAAGTAGTAGTTCATCTGGTTCAGCTCCAGAAGAGGTAGTTCAACGACTGCAGTTGCCAGCTTGGGATATTTTGGAAGCACTTCCTTTTGTGCTAGATGCTGCTTTAACAGCCTGTGCCAATGATAAGTTGTCTTCACGTGACCTAGCAACAGGGTTGAAGGACCTTGCCGATTTCCTTCCAGCATCGTTGGGAAGCATAATTAGCTACTTCTCAGCTGAAGTAACAAGAGGAGTCTGGAAGCCAGCTTCTATGAATGGAACTGATTGGCCAAGTCCTGCTGCTAATTTATCCACGGTTGAGCAACAAATTCAGAAACTGCTCGCTGCCACAGGAATTGATGTCCCTAGTCTATCAACAGTGGGCAACTCTATTCCTGTACTTCCGCTACCATTGGCTGCACTGCTGAGCCTTACCATTACATACAAACTTGATAAAGCTCATGAACGCTTCTTGAACTTGGTTGGTAAATCAGTGGTTGTATTTGCGGCTGGATGTCCTTGGCCTTGCCTACCCATTCTATCTTCACTGTGGGCTTTAAAGGCAAAGCGTTGGAGTGACTTCCTGATCTTCTCCGCCTCGCGCACCGTATTCAATCGTAACAATGATGCTGTCGTCCAACTTCTAAGGAGCTGTTTTTCCTCTGTCTTGGGACTCAAATCTTCCCCTTGGTGTAAAAGTGGAGGCGTTGGTGCTCTTCTTGGCCATGGCTTGGGCTCCCATTTCTCTGGTGGGATGTCTCCTGTTGCCCCCGGTATCTTCTACCTACGTGTGTACCCATTTGTCAGAGACTTGATACTCATGACCGAAGAAATTCTCTCTCTCCTCATGACTTCTGTTAGAGATATTGCTTCTTCTGGTTTATCAAGAGACTCCTTAGATAAACTGAAGAAAACCAAGTTTGGAATGAGATATGGGCAAGTTTCTCTCATGTCAGCAATGACACGAGTCAAGGTTGCAGCTTCTGTTGGGGCCTCGTTCATCTGGATAGCTGGTGGGTTGAACTTGGTACAGATGCTGATAAAAGAGATTCTTCCCTCTTGGTTTTTATCGACCCAGAGATCTGACCAGATTCGAGGAGACTCAGGAGGCACTGTCGCAACTTTGAGCGGTTATGCACTTGCGTACTTGGCATTGCTCACTGGGTTATTCTCATGGGGCACAGATGCATCATCCCCAGCCGCAAAATGGCGTCCCAAGGTCCTCACTTCCCACCTCCAATTTATGGCAACAGCCATCGAAGGTAAGGTCTCTCTCGGATGTGATTGGGCCACTTGGCGGGCCTATGTTTCTGGTTTCTTGAGCTTGATGGTCCGGTGCACTCCGGCATGGTTACTTGAGGTTGATGCTCATGTTTTAAAGAACCTAAGTAAAGGTTTGCAACAATGGAACGAAGAAGAATTGGCTGCGACCTTGCTTGAGGTTAGTGGCTTTAATGCAATGGGTGCTGCTGCCGAATTGATCATTCAAAGTGCTCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88448.p1 GENE.S_Transcript_88448~~S_Transcript_88448.p1 ORF type:complete len:1013 (+),score=178.39 S_Transcript_88448:476-3514(+)
MAPGSFVPSAAQWHGASCSALWLPIDLFLEDSMEHITVSPTCAIDTLTGIVKSLQALNSTTWHDTFLGLWIATLRLVQRERNPYEGPVARLDSCLCMLLSIVPLVLVNLIEEEQSTLDKESEFGVKEDKEIYGSRRCQLVCSLQLLGEYEGLLTPPSLIAPLANQAAVKAVLYLSGFNIGSGYLDSVNINDVPMNCAGNLHHLIVEACIVRNLLDISAYMWPGYVNARVSQIPCGVAGQVTGWSSLMKGSPLSSTMANSLISTPASSLAEIEKIYEIAVGGSDEEKMRAATVLCGASLVRGWNVQEHVVVFILRLLSPLKPVEYSGTDSHLISCGPFLNVILVGIATMDIVQIFSLHGLIPQLTGALMPICEVFGSCSPKVSWTLSTGEEINAHAVFSNAFTLLLKLWRFDHTPVEQLGDVPSVVSQQSPEYLLLVRNSQLANTAIDQNRSQRFTKLLSPMPADPIFMDSFPKLKCWYRQHQACIASPLSGLTPGTPVHQIVEALLTMLFKKMNRGTTSGSSSSSGSAPEEVVQRLQLPAWDILEALPFVLDAALTACANDKLSSRDLATGLKDLADFLPASLGSIISYFSAEVTRGVWKPASMNGTDWPSPAANLSTVEQQIQKLLAATGIDVPSLSTVGNSIPVLPLPLAALLSLTITYKLDKAHERFLNLVGKSVVVFAAGCPWPCLPILSSLWALKAKRWSDFLIFSASRTVFNRNNDAVVQLLRSCFSSVLGLKSSPWCKSGGVGALLGHGLGSHFSGGMSPVAPGIFYLRVYPFVRDLILMTEEILSLLMTSVRDIASSGLSRDSLDKLKKTKFGMRYGQVSLMSAMTRVKVAASVGASFIWIAGGLNLVQMLIKEILPSWFLSTQRSDQIRGDSGGTVATLSGYALAYLALLTGLFSWGTDASSPAAKWRPKVLTSHLQFMATAIEGKVSLGCDWATWRAYVSGFLSLMVRCTPAWLLEVDAHVLKNLSKGLQQWNEEELAATLLEVSGFNAMGAAAELIIQSAR*

Click here to download the sequence:
Link to NCBI Protein BLAST