Transcript Information: S_Transcript_88480.p1


Annotated TAIR IDAT1G03110.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)TRM82, AtTRM82
Annotation TypeHomolog
Chromosome Positionchr1:749359-751796 | Forward length=427
E-Value7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.60450635255
Replicate 28.722498197157
Replicate 38.7924672026468
Condition 2: 8 Hour
Replicate 17.8110441277871
Replicate 210.145373220341
Replicate 311.401499881734
Condition 3: 24 Hour
Replicate 15.2072105995021
Replicate 25.1388875085904
Replicate 37.625269238756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88480.p1 GENE.S_Transcript_88480~~S_Transcript_88480.p1 ORF type:5prime_partial len:172 (+),score=42.85 S_Transcript_88480:1-516(+)
TGCCATCCTGCTGTAACTGATCTGTGTGCCACTCCTGATGGGTCATTAGTTGCAGTTGCAATTCAAAGCTTGCAAGGAATATTGTTATTGAGCTGTGACCTTTCAGCCAGAACGCTTTCCGTCTTCAAGGTGGTTTCTATACCAGGAGAGAAATTCATCCCTACAGGTCTAGGAATGACTTCTTCAGGGGACTACTTGTGGATGGTCACAGGTGCCTCTAATTTACCTGGTTCAAAAGCTTCATCATTGGCACGGGTCAAAGTCATGTCCAGTTTCAGGAAAACGACGTCAGATGGATCTGATGAGCCTCAAGTTTTGGAAGATCAAGAAATTCATGGAGGAGAGCAGTTGCTGGAGAAGTTGCAGGGCAGTGTGTGTGTGGAGGGTACAATTTTCTCTGCTGCCGCTGATGCCGTAAATGCTGCTATGAGCAACTTATTGAGGAAAAAGCAGTATTCGGACGAAAAACGCGAGTTCAGGAAGAAGACCAGAAATGATAAGAAATTTAATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88480.p1 GENE.S_Transcript_88480~~S_Transcript_88480.p1 ORF type:5prime_partial len:172 (+),score=42.85 S_Transcript_88480:1-516(+)
CHPAVTDLCATPDGSLVAVAIQSLQGILLLSCDLSARTLSVFKVVSIPGEKFIPTGLGMTSSGDYLWMVTGASNLPGSKASSLARVKVMSSFRKTTSDGSDEPQVLEDQEIHGGEQLLEKLQGSVCVEGTIFSAAADAVNAAMSNLLRKKQYSDEKREFRKKTRNDKKFNG*

Click here to download the sequence:
Link to NCBI Protein BLAST