Transcript Information: S_Transcript_88540.p1


Annotated TAIR IDAT5G50600.1
Annotated Gene Namehydroxysteroid dehydrogenase 1
Annotated Gene Symbol(s)ATHSD1, HSD1
Annotation TypeOrtholog
Chromosome Positionchr5:20589917-20591653 | Reverse length=349
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2510660493885
Replicate 20.62441857238249
Replicate 30.52196422878115
Condition 2: 8 Hour
Replicate 11.2070975651207
Replicate 21.0552758792324
Replicate 32.2120219212717
Condition 3: 24 Hour
Replicate 10
Replicate 21.7104763453847
Replicate 30.95177526057042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88540.p1 GENE.S_Transcript_88540~~S_Transcript_88540.p1 ORF type:complete len:106 (+),score=17.43,adh_short|PF00106.21|1.3e-22 S_Transcript_88540:107-424(+)
ATGATTCAAGTGGACCATTTGGTGAGTAATGCTGGCATCACTTCAATTAGCATGTTTGAAGATTATGAAGATGTCACCAAAGCAAGATCTGTTATGGATATTAATTTTCGAGGTTCTGTTTATGTAACTCATTTTGCGATTCCACACCTCAGAAAACCCGGAGGGAAGATCGTCGCCATGTCATCCTCTTCTTCTTGTGTGCCTCAACCAAGAATGAGTATTTACTCTGCAAGTAAAGCAGCAATGACAACTCTATATGAGACGTTAAGGGTAGAACTTCCAAGGAGAAAAGCCGATAGTGGACCAAAATGTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88540.p1 GENE.S_Transcript_88540~~S_Transcript_88540.p1 ORF type:complete len:106 (+),score=17.43,adh_short|PF00106.21|1.3e-22 S_Transcript_88540:107-424(+)
MIQVDHLVSNAGITSISMFEDYEDVTKARSVMDINFRGSVYVTHFAIPHLRKPGGKIVAMSSSSSCVPQPRMSIYSASKAAMTTLYETLRVELPRRKADSGPKCS*

Click here to download the sequence:
Link to NCBI Protein BLAST