Transcript Information: S_Transcript_88564.p1


Annotated TAIR IDAT1G04830.2
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1358782-1361844 | Reverse length=459
E-Value6.5E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4216715873804
Replicate 22.9417052743353
Replicate 32.1955638194763
Condition 2: 8 Hour
Replicate 13.9096548914744
Replicate 24.0482392776648
Replicate 33.603393285604
Condition 3: 24 Hour
Replicate 12.3405232311351
Replicate 22.4822269821714
Replicate 32.2819944937962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88564.p1 GENE.S_Transcript_88564~~S_Transcript_88564.p1 ORF type:complete len:420 (+),score=72.67,RabGAP-TBC|PF00566.14|2.1e-49 S_Transcript_88564:346-1605(+)
ATGGTGAATGTGAATCAGAAAGAGAAGCCATCGCCGAAGAAGGTTCCAGATTGGTTGAATTCCTCCATGTGGTCATCCCCTCCACCTCCCATCCCTCCGCCGGAAGAATCCCCCCGTCGCTCCATTTCCGGCAACTTCAGCGACTCCGATTCTCCCACTACGACCACACGTGTCCCTCCGGCGCCACATCAGCCTCCAATTCGGCCCGATCCTCCCCCTCCTCCCCCTTCCAAGTCCAATGGCAATGGCAATGACACCTCCACGTCGAACTCCAACTCCTTAGCCTCCACGTCATCATCGTCAACTTCCGCCCTCTCTGCCGAGGAGATCTCTCGCCAAGCCCAGCTCTTAGTCGAGGTGTCCAAGAAGGTGATAAATATGCGGGAAGTGAGGAGACTGGCGTCGATGGGGATACCTGATGGGCCTAGTCCTGGCAATGCAGGAGTCCGTTCTACAGTTTGGAAGCTTCTCTTGGGGTATTTGCCCTCTGAACGCTCCTTGTGGTCTTCTGAATTGTCCAAAAAACGCTCTCAATATAAGCATTTCAAGGACGATCTCTTGATGTCTCCCGACACAGAGATAATAGAGCAAATTGATCGGGACGTGAAACGCACTCACCCAGATATGCAATTCTTCTCTGGTGACACTACTTCTGCCAACTTAAATCAGGAGGCTTTGAGGAACATATTGATGGTGTTTGCAAAGCTAAACCCCGGAATAAGATATGTACAAGGAATGAATGAAATCCTAGCACCTCTCTTCTATGTTTTCAGGAATGATCCTGATGAGGAAAATGCGGCTGCTGCCGAAGCAGATACATTCTTTTGTTTTGTTGAGTTGCTGAGTGGGTTCAGGGATAATTTCTGCCAGCAACTTGATAACAGTGTTGTGGGAATCCGTTCCACAATTACAAAGTTGTCACTACTTTTGAAGGAACACGATGAAGAGCTTTGGCGTCATTTGGAGGTGACATGCAAGATCAATCCGCAGTTTTATGCATTTAGATGGATAACTCTCCTCTTGACTCAAGAATTCAGCTTCGTGGATAGCCTTCATATTTGGGATACTCTGCTAAGTGATCCTGAAGGGCCTCAGGAAACATTGCTAAGGATCTGTTGTGCAATGCTGATTCTTATCCGGAGACGGTTGTTGGCTGGTGATTTTACTTCCAATCTCAAGTTGTTGCAAAACTATCCTTCAACAAATATTAGCCATCTATTATATGTTGCAAACAAGTTAAGGGCTCATCCGACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88564.p1 GENE.S_Transcript_88564~~S_Transcript_88564.p1 ORF type:complete len:420 (+),score=72.67,RabGAP-TBC|PF00566.14|2.1e-49 S_Transcript_88564:346-1605(+)
MVNVNQKEKPSPKKVPDWLNSSMWSSPPPPIPPPEESPRRSISGNFSDSDSPTTTTRVPPAPHQPPIRPDPPPPPPSKSNGNGNDTSTSNSNSLASTSSSSTSALSAEEISRQAQLLVEVSKKVINMREVRRLASMGIPDGPSPGNAGVRSTVWKLLLGYLPSERSLWSSELSKKRSQYKHFKDDLLMSPDTEIIEQIDRDVKRTHPDMQFFSGDTTSANLNQEALRNILMVFAKLNPGIRYVQGMNEILAPLFYVFRNDPDEENAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEVTCKINPQFYAFRWITLLLTQEFSFVDSLHIWDTLLSDPEGPQETLLRICCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST