Transcript Information: S_Transcript_88567.p1


Annotated TAIR IDAT4G13730.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7970299-7974055 | Forward length=449
E-Value2.7E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7213094947498
Replicate 24.8612926143677
Replicate 35.1186407350671
Condition 2: 8 Hour
Replicate 17.8162977221695
Replicate 27.2044936297425
Replicate 36.6386220295175
Condition 3: 24 Hour
Replicate 14.4430271506293
Replicate 25.9540521937862
Replicate 34.702415058581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88567.p1 GENE.S_Transcript_88567~~S_Transcript_88567.p1 ORF type:complete len:472 (+),score=78.89,RabGAP-TBC|PF00566.14|0.63,RabGAP-TBC|PF00566.14|4.1e-42 S_Transcript_88567:308-1723(+)
ATGGTGAATGTGAATCAGAAAGAGAAGCCATCGCCGAAGAAGGTTCCAGATTGGTTGAATTCCTCCATGTGGTCATCCCCTCCACCTCCCATCCCTCCGCCGGAAGAATCCCCCCGTCGCTCCATTTCCGGCAACTTCAGCGACTCCGATTCTCCCACTACGACGACACGTGTCCCTCCGGTGCCACGTCAGCCTCTAGCTCGGCCCGATCCTCCCCCTTCCAAGTCCAAGTCCAAGTCCAATGGCAATGGCAATGACACCTCCACGTCGAACTCCAACTCCTTAGCCTCCACGTCATCATCGTCAACTTCCGCCCTCTCTGCCGAGGAGATCTCTCGCCAAGCCCAGCTCTTAGTCGAGGTGTCCAAGAAGGTGATAAATATGCGGGAAGTGAGGAGACTGGCGTCGATGGGGATACCTGATGGGCCTAGTCCTGGCAATGCAGGAGTCCGTTCTACAGTTTGGAAGCTTCTCTTGGGGTATTTGCCCTCTGAACGCTCCTTGTGGTCTTCTGAATTGTCCAAAAAACGCTCTCAATATAAGCATTTCAAGGACGATCTCTTGATGTCTCCCTCAGAGATTACGAGGAGGTTGGAGAAGTCGGCTAGCCTTGAAACGGACGAGCTCAAAGGCGACAGTCGTTGTGTGCTCTCCAGATCCGAAGTTACACATGGAGAACATCCTTTAAGCCTTGGCCAGTCTAGTGTTTGGAATCAATTTTTTCAGGACACAGAGATAATAGAGCAAATTGATCGGGACGTGAAACGCACTCACCCAGATATGCAATTCTTCTCTGGTGACACTACTTCTGCCAACTTAAATCAGGAGGCTTTGAGGAACATATTGATGGTGTTTGCAAAGCTAAACCCCGGAATAAGATATGTACAAGGAATGAATGAAATCCTAGCACCTCTCTTCTATGTTTTCAGGAATGATCCTGATGAGGAAAATGCGGCTGCTGCCGAAGCAGATACATTCTTTTGTTTTGTTGAGTTGCTGAGTGGGTTCAGGGATAATTTCTGCCAGCAACTTGATAACAGTGTTGTGGGAATCCGTTCCACAATTACAAAGTTGTCACTACTTTTGAAGGAACACGATGAAGAGCTTTGGCGTCATTTGGAGGTGACTTGCAAGATCAATCCTCAGTTTTATGCATTTAGATGGATAACTCTCCTCTTGACTCAAGAATTCAGCTTCGTGGATAGCCTTCATATTTGGGATACTCTGCTAAGTGATCCTGAAGGGCCTCAGGAAACATTGCTAAGGATCTGTTGTGCAATGCTGATTCTTATCCGGAGACGGTTGTTGGCTGGTGATTTTACTTCCAATCTCAAGTTGTTGCAAAACTATCCTTCAACAAATATTAGCCATCTATTATATGTTGCAAACAAGTTAAGGGCTCATCCGACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88567.p1 GENE.S_Transcript_88567~~S_Transcript_88567.p1 ORF type:complete len:472 (+),score=78.89,RabGAP-TBC|PF00566.14|0.63,RabGAP-TBC|PF00566.14|4.1e-42 S_Transcript_88567:308-1723(+)
MVNVNQKEKPSPKKVPDWLNSSMWSSPPPPIPPPEESPRRSISGNFSDSDSPTTTTRVPPVPRQPLARPDPPPSKSKSKSNGNGNDTSTSNSNSLASTSSSSTSALSAEEISRQAQLLVEVSKKVINMREVRRLASMGIPDGPSPGNAGVRSTVWKLLLGYLPSERSLWSSELSKKRSQYKHFKDDLLMSPSEITRRLEKSASLETDELKGDSRCVLSRSEVTHGEHPLSLGQSSVWNQFFQDTEIIEQIDRDVKRTHPDMQFFSGDTTSANLNQEALRNILMVFAKLNPGIRYVQGMNEILAPLFYVFRNDPDEENAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEVTCKINPQFYAFRWITLLLTQEFSFVDSLHIWDTLLSDPEGPQETLLRICCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST