Transcript Information: S_Transcript_88610.p1


Annotated TAIR IDAT5G08560.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2771104-2773827 | Reverse length=589
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.71862541555
Replicate 234.38307582245
Replicate 333.019469070639
Condition 2: 8 Hour
Replicate 149.832527201548
Replicate 246.704117005615
Replicate 346.037835806635
Condition 3: 24 Hour
Replicate 138.847859815747
Replicate 233.489481023469
Replicate 340.476614217145


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88610.p1 GENE.S_Transcript_88610~~S_Transcript_88610.p1 ORF type:complete len:582 (+),score=107.31,WD40|PF00400.28|0.00011,WD40|PF00400.28|0.06,WD40|PF00400.28|0.0034,WD40|PF00400.28|3.4e+03,WD40|PF00400.28|0.011,WD40|PF00400.28|6.6e-07 S_Transcript_88610:156-1901(+)
ATGGGAGGTGTAGAGGATGGCCAACCACCCTCAAAACGGCTGAGATCATCTTTTGTAGGATCGAGCAGTCTTTCGAGTGGTTTAGGAGCTGAAGAACCCATAGTTGCTAGCTCTTTGAGGAACTTGATGGCCCGACCCATACAATGCCAAGGGCAAGAAGAGGTGGTTGGTTCAAGAGGGGTTATAAAAAAGATAGAGTTTGTGCGACTGATAGCCAGTGCATTACATGCTCTTGGTTATAAGCGCAGTGGTGAATGTTTGGAGGAAGAATCTGGTATACCGTTGCACTCTAACACAGTAAGTTTGCTCATGCAGCATGTTCTTGATGGGAGGTGGGATGAAAGTGTCTCTACATTGCAGAAAATTGGGTTAGAGGATGAAACTATTATCAAATCAGCCAAATTTTTGATTTTGGAGCAGAAGTTTTTTGAGCTTTTAAATAATGGAAAGATAATGGATGCGTTAAAGACATTGAGGACCGAAATCTCACCTCTGTATATTAAGACAAGTAGAGTACATGAGCTTTCTTCCTGTCTTCTCTCTCACTCCCATAGTCAAAATGGACCTTATTGCAAAGACAAGCTAAAATCAAAATTGCATACAGAAGTTCTCGATGAATTGCAGAAACTACTTCCTCCCTCAATAATGGTTCCTGAAAGACGTCTGGAACATCTAGTTGAACAGGCTTTGAATTTGCAACGTGGTGCCTGCATATTTCACAATTCATCAGCCCGGGAAATGTCATTGTACACTGACCATCATTGCGGAAGGGACCATATACCTCGTTATACTTCACAGATACTAGAAGGACATCAAGACGAAGTTTGGTGTTTGCAATTTTCACATCAAGGGAAATACTTAGCATCAGCATCCAATGATCATTCAGCTATCATATGGGAGGTTGATTTAAATGGTGAAGTAATCCTGAAGCATAGATTGTATGGCCATCAAAAACCAGTTTCTCAAGTTTCTTGGAGCCCAGATGATCAGCAGCTTCTCTCCTGTGGGGCAGAAGAGACTGTACGACGGTGGGATGTTTTGTCCGGTGAATGCCTCCAAATATATGAGAAGGCTGGTCTTCCTGTTGTATCCTGTGCATGGTCTCCTGATGGGAAGTTTGTATATGCTGGCTTGCTGGATAAAAGCATATGCGTGTGGGATCTAAATGGAAAGGAGGTGGAATGTTGGAAAGAACAAAAAACCCTTAGAATTTCAGATCTGGAAATAACAAGCAATGGGAAACAAATCATAAGTATGTGCAGAGAAAAATCAATTTTATTGTTGGACAGGGAAACAAAAGAAGAGAAGTTGATTGAGGAGGACCAAACAATAACTTCATTCTCCCTTTCAAATGATAGCAAGTTGTTACTTGTTAATCTTCTTAACCAAGAAATTCATCTGTGGAATATAGACGGTGACATTCAGCTCCTTGGCAAGTACAAAGGTCATAAACGTTCAAGATTTATAATAAGATCCTGCTTTGGTGGTCTTGAACAATCTTTCATAGCCAGTGGCAGTGAGGATTCACAGGTTTACATTTGGCATTGTGGTTCTGGACAGCTTGTAGACATATTGCCAGGCCACTCGGGAGCTGTCAACTGTGTGAGCTGGAATCCTGTAGACCCCCACATGTTAGCATCAGCAAGTGATGACCGTACTATTCGGATATGGGGCTTGCATGGAGCAAATATCAAGCAAAAGGTTTCTCAGAGCAATGGCACACATTACTGCAATGGAAAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88610.p1 GENE.S_Transcript_88610~~S_Transcript_88610.p1 ORF type:complete len:582 (+),score=107.31,WD40|PF00400.28|0.00011,WD40|PF00400.28|0.06,WD40|PF00400.28|0.0034,WD40|PF00400.28|3.4e+03,WD40|PF00400.28|0.011,WD40|PF00400.28|6.6e-07 S_Transcript_88610:156-1901(+)
MGGVEDGQPPSKRLRSSFVGSSSLSSGLGAEEPIVASSLRNLMARPIQCQGQEEVVGSRGVIKKIEFVRLIASALHALGYKRSGECLEEESGIPLHSNTVSLLMQHVLDGRWDESVSTLQKIGLEDETIIKSAKFLILEQKFFELLNNGKIMDALKTLRTEISPLYIKTSRVHELSSCLLSHSHSQNGPYCKDKLKSKLHTEVLDELQKLLPPSIMVPERRLEHLVEQALNLQRGACIFHNSSAREMSLYTDHHCGRDHIPRYTSQILEGHQDEVWCLQFSHQGKYLASASNDHSAIIWEVDLNGEVILKHRLYGHQKPVSQVSWSPDDQQLLSCGAEETVRRWDVLSGECLQIYEKAGLPVVSCAWSPDGKFVYAGLLDKSICVWDLNGKEVECWKEQKTLRISDLEITSNGKQIISMCREKSILLLDRETKEEKLIEEDQTITSFSLSNDSKLLLVNLLNQEIHLWNIDGDIQLLGKYKGHKRSRFIIRSCFGGLEQSFIASGSEDSQVYIWHCGSGQLVDILPGHSGAVNCVSWNPVDPHMLASASDDRTIRIWGLHGANIKQKVSQSNGTHYCNGKL*

Click here to download the sequence:
Link to NCBI Protein BLAST