Transcript Information: S_Transcript_88627.p1


Annotated TAIR IDAT4G38020.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17861568-17863010 | Forward length=352
E-Value1E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.8579191206328
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.5494840016775
Replicate 30.89750937284132
Condition 3: 24 Hour
Replicate 10.53654099801459
Replicate 21.033787896465
Replicate 31.4159744227434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88627.p1 GENE.S_Transcript_88627~~S_Transcript_88627.p1 ORF type:complete len:285 (+),score=46.67,SpoU_methylase|PF00588.15|3.3e-29 S_Transcript_88627:582-1436(+)
ATGGGGAAAAGTACACTTCTTGAGCTCAAATTCCCTCAGTTTCTGTCTACTGATATTTGGGAACTTTTTTTTATATATATATATATATTGTGGCACAGGGAAATCCTTGAATTTCATAAGTTGAACCAAGAGCAACAATTGAGAATTGAATGCGTTTTTTTGCTGGATAAAGCTGAGGTTCCTGAAGAAATATGTGATGCTCTAGGAGAGAGAGTCCAAGTGAGTTCTGTAGTGATGAAAAAACTCTCAGGGGTACAATCAACCGAGTCTATTGATGCTATAGCTCTCATAAGAATTCCCCCCAGTTTTCTGAATTTGAATGATGAGTATGACCAATCATATATTATGGATTCTAAGAAATGGTTCCCATGTCTTCATCGAATTCTAGTGCTTGAAGGGATTCAGGATCCAGGAAACCTAGGTACATTGCTTAGATCTGCCTTGGCATTTAAATGGAATGGTGTCTTTTTGCTTCCTGGATGTTGTGATCCATTCAACGAGAAGGCAATCAGGGCAAGCAGAGGAGCTTCCTTCCAGCTGCCTATAGTATCTGGAACCTGGACCCATCTTGAAGCGCTAAAACATGAAGTTCAAATGAAGATGCTAGCTGGTCATCCTGACAGTAAGAATACCAGAAAGCCTGTTTTGAAGCTGTCGACAGGGCTCGCAAATTCTTTAACTGATACACCATTATCCTTAGTTCTGGGCAGTGAGGGGAGTGGCCTTTCAGTGAAAGCTAAGGAATTGTGTGAACTGGTGAGCATACCAATTTCAGAGCATTTTGAGTCTCTCAATGTAGCAGTAGCAGGTGGGATTTTTATGTTTGTACTGAAATCTGACAACCCTCAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88627.p1 GENE.S_Transcript_88627~~S_Transcript_88627.p1 ORF type:complete len:285 (+),score=46.67,SpoU_methylase|PF00588.15|3.3e-29 S_Transcript_88627:582-1436(+)
MGKSTLLELKFPQFLSTDIWELFFIYIYILWHREILEFHKLNQEQQLRIECVFLLDKAEVPEEICDALGERVQVSSVVMKKLSGVQSTESIDAIALIRIPPSFLNLNDEYDQSYIMDSKKWFPCLHRILVLEGIQDPGNLGTLLRSALAFKWNGVFLLPGCCDPFNEKAIRASRGASFQLPIVSGTWTHLEALKHEVQMKMLAGHPDSKNTRKPVLKLSTGLANSLTDTPLSLVLGSEGSGLSVKAKELCELVSIPISEHFESLNVAVAGGIFMFVLKSDNPQS*

Click here to download the sequence:
Link to NCBI Protein BLAST