Transcript Information: S_Transcript_88646.p1


Annotated TAIR IDAT2G01720.1
Annotated Gene NameRibophorin I
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:317193-320016 | Reverse length=464
E-Value1.6E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.449888066475
Replicate 223.357879929864
Replicate 321.961161625755
Condition 2: 8 Hour
Replicate 126.690268384336
Replicate 226.874359057785
Replicate 329.627687551578
Condition 3: 24 Hour
Replicate 117.127854141472
Replicate 218.767726567416
Replicate 319.564269245059


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88646.p1 GENE.S_Transcript_88646~~S_Transcript_88646.p1 ORF type:complete len:477 (+),score=77.10,Ribophorin_I|PF04597.10|4.1e-140 S_Transcript_88646:91-1521(+)
ATGGCGACACAGGTCCGACTAGGGAATGCCATCGCACTCTTTCTCTTCTTCTCTCTCTCTTTTCTCATCGGATCGTCGTTCTCTGTCCCCATTGACGACCTGCAAATCATTAATGCCGAACGGCGAATCGATTTGACTTCACACATTATCAAGGTCTTTTTAACCCTAAAGGTTGAAAACACGGGCACATCTCCTGCCTCAGAAATCCTCCTTGCTTTTTCTCCTTCCCAAAGTGAACATTTAGCACTGTTGAAAGCAGCCTTGGTTGGTGGAAAGAGAAAAAAGAAAACATATACTTCTCTTGATGTTAATCCCAAGCTTCCTGATGGACCTAACGGTACAAAATATTTCTCCGTTGCTTTACTTGACCCGCTGAAAGCAGGTGAAGCTATAACAGTGGAGGTCCTATTCATACTGACCCGCTTCCTTGAGCCATTCCCATCAGAAATAACTCAATCCGAATCGCAGTTGGTTTATTACCGTGACAGTGCAATCATATTGTCACCATATCATATCAAACAGCAGATGACATTTATGAGGACTCCAAGCAACAGGGTGGAATCATATACAATTCTGGAGCCAACCAACCATGCCAGTACCGAGCTGAAATATGGGCCATACAATGATAAACCCTCACACTCATTTTCACCTATTATTGTCCACTTTGAGAATAACCAACCATTTGCTGTTGTTGAGGAGCTGGTACGTGAAATTGAAATTTCTCACTGGGGTAGCATTCAAGTGAAAGAGCATTACAGTTTGGCTCATGCTGGTGCTCGGCTTAAGGGAGTATTTTCAAGATTGGAATATCAGTCTGGTGCTTCAGTAAGTGGTGTTGCTTCATTTAAGCAGCTTCTTGCTAGGCTACCACCCAGAGTTCACTCTGTCTACTACAGAGATGATATAGGAAACATCTCATCGTCACATTTGCGAAAGAACTCAAGGCAGTCAGAGCTGGAAATAGCACCTCGTTATCCTCTTTTTGGAGGTTGGAAAGCCACTTTTGTCCTTGGGTATGGATTGCCATTGGGAGATTTTGTTTATGAATCAACTGAAGGAAGGCGATATCTGAACTTCACTTTTGGATGTCCAATTGCAGACACAGTTGTTGACAAGCTAATTATAAAAGTAATTCTGCCAGAGGGATCAAAAGATCCTACTGCTGTGGTTCCTTTTCCGGTGCAGCAACATTTGGAGAATACTTATTCATATCTTGACATTATTGGAAGGACTGTTGTGGTGTTGGAAAAGAGGAATGTGGTGCCTGAACACAATTCCCCGTTTCAGGTTGACTACAGTTTCAACCCTGTATTTATGCTTGGAGAGCCATTGATGTTGGTGTCCGTATTCCTCTTATTTTTCTTGGCTTGCGTGACCTACCTACATTATCCTGATCTTTCAGTGGCATACAATGGTAGTATATCCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88646.p1 GENE.S_Transcript_88646~~S_Transcript_88646.p1 ORF type:complete len:477 (+),score=77.10,Ribophorin_I|PF04597.10|4.1e-140 S_Transcript_88646:91-1521(+)
MATQVRLGNAIALFLFFSLSFLIGSSFSVPIDDLQIINAERRIDLTSHIIKVFLTLKVENTGTSPASEILLAFSPSQSEHLALLKAALVGGKRKKKTYTSLDVNPKLPDGPNGTKYFSVALLDPLKAGEAITVEVLFILTRFLEPFPSEITQSESQLVYYRDSAIILSPYHIKQQMTFMRTPSNRVESYTILEPTNHASTELKYGPYNDKPSHSFSPIIVHFENNQPFAVVEELVREIEISHWGSIQVKEHYSLAHAGARLKGVFSRLEYQSGASVSGVASFKQLLARLPPRVHSVYYRDDIGNISSSHLRKNSRQSELEIAPRYPLFGGWKATFVLGYGLPLGDFVYESTEGRRYLNFTFGCPIADTVVDKLIIKVILPEGSKDPTAVVPFPVQQHLENTYSYLDIIGRTVVVLEKRNVVPEHNSPFQVDYSFNPVFMLGEPLMLVSVFLLFFLACVTYLHYPDLSVAYNGSISL*

Click here to download the sequence:
Link to NCBI Protein BLAST