Transcript Information: S_Transcript_88706.p1


Annotated TAIR IDAT1G20580.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7128979-7130371 | Forward length=131
E-Value1.9E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1144.75859762772
Replicate 2107.63967026545
Replicate 3109.81811031598
Condition 2: 8 Hour
Replicate 1126.65989400479
Replicate 2121.0113630967
Replicate 3122.56612372864
Condition 3: 24 Hour
Replicate 184.566177755255
Replicate 288.251508713959
Replicate 3107.76691700368


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88706.p1 GENE.S_Transcript_88706~~S_Transcript_88706.p1 ORF type:complete len:132 (+),score=24.19,LSM|PF01423.18|4.8e-16 S_Transcript_88706:138-533(+)
ATGAGTCGAAGCTTGGGAATACCAGTGAAGTTGATGCACGAGGCCACTGGGCATGTCGTCACCGTGGAACTCAAGAGTGGGGAGCTTTATCGAGGCACCATGGTTGAGTGTGAAGACAACTGGAACTGTCAACTTGACAACATCACCTTCACCGCTAAGGATGGAAAGGTCTCTCAACTTGAACATGTATTCATTCGAGGTAGCAGAGTCAGGTTTATGATCATACCCGATATGCTGAAGAATGCGCCAATGTTTAAACGTCTAGATGCCAGGATTAAGGGTAAGAGCACAGCTCTTGGAGTTGGTCGTGGACGTGCTGTAGCAATGCGAGCAAAGGCTCAGGCTGCTGGCCGAGGTGCTACAGGTAGGGGAGTTGTACCCCCAGTGCGCAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88706.p1 GENE.S_Transcript_88706~~S_Transcript_88706.p1 ORF type:complete len:132 (+),score=24.19,LSM|PF01423.18|4.8e-16 S_Transcript_88706:138-533(+)
MSRSLGIPVKLMHEATGHVVTVELKSGELYRGTMVECEDNWNCQLDNITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLDARIKGKSTALGVGRGRAVAMRAKAQAAGRGATGRGVVPPVRR*

Click here to download the sequence:
Link to NCBI Protein BLAST