Transcript Information: S_Transcript_88767.p1


Annotated TAIR IDAT5G12410.1
Annotated Gene NameTHUMP domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4021974-4023950 | Reverse length=376
E-Value3.8E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.003314527569
Replicate 210.556625889545
Replicate 311.06564165016
Condition 2: 8 Hour
Replicate 116.034533985287
Replicate 216.53817671595
Replicate 317.214570597441
Condition 3: 24 Hour
Replicate 110.673575984012
Replicate 29.6966687503866
Replicate 312.451389010121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88767.p1 GENE.S_Transcript_88767~~S_Transcript_88767.p1 ORF type:5prime_partial len:395 (+),score=98.05,THUMP|PF02926.13|7.7e-12 S_Transcript_88767:3-1187(+)
CCAGTCAAGAATTCAGGCTTCACTCACGTTCTCTGGGGAGTCGTCATGGGCGAAGCAAAAATAGCAATCAACGATGGCAAGAAACGCAGAAGATGTTACTTACCTCATAACAAACCAGTAAAGAGGAAGGGACCAATCCCATTAAGGCCAGGAGTGCAAGGCTTCTTCATAACCTGTGATGGTGGAAGGGAACGCCAGGCTTCTCATGAAGCCCTCAATGTTCTTGACTCTTTCCTCGAAGAACTAATCGACGGGAAGGAGCCCAAGACAGATGTTGCAGCAATACCTGAGAAACCATTGAACAAGAAGATAACATTTACGTATTCTGATTCTTCTGATAGTGGAGAAGACGATGAAGATGACGATGATAATAAAACTGAGGGGGAAGAGGAGAACAAGTCAGAAATACCTGCTAAAGATGATGTAAATAATGAAAGTCCCAAGGACGGAAGTTCTGATCATGCAAAGAAGGATGATCAAGAGCATGAGGTTCCATCTGAGAAAACTGCTGAAGAAGATAAAGAAGTTAGTAAGCAACAGGAAGATAGCGAAAACAAGGAGAGTGAGGAACCACCAGCAAAGAAAAAATGCTGTGATAACAAAGTATTAGAAAGCAAAAATCATGTCCCTGATAAAAAAGCGAAGTCTGTTGATCAGTTAATTGAAGATGAGCTGAAGGAATTAGGAGATAAGAGCAAGAGGCGATTTTCCAAACTTGATACGGGTTGTAATGGTGTTGTCTTCATTCAAATGCGAAGAAGCCAGGGAGATCCCAGCCCGACAGATATTGTAAAACACATGATGGAATCCTCTGCAAGGACAAAGAAACACATCTCTAGGTTTCTGCTTAGAGTCTTACCTGCAGAAGTCTCATGCTATGCTTCTGGGGAAGAAATCTCAAGATCCATGAAACCACTTGTTGAGCGATACTTTCCTGTTGATGCAGAGACACCGGTTAAGTTTGCAGTCCAATATGATGCTCGTGCAAATTCAGGGATTGACAGGATGACAATAATAGATGCAGTTGCAAAATCTGTTCCTGGACCGCACAAAGTGGATCTCAAAAATCCAGAGAAGACCATTGTAGTCCAAATCATTAAGACTGTATGCTTGGTTGGGGTTGTGGAGAAGTACAAGGAGCTTGCGAAGTACAATTTGAGACAACTAACATCATCTCACCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88767.p1 GENE.S_Transcript_88767~~S_Transcript_88767.p1 ORF type:5prime_partial len:395 (+),score=98.05,THUMP|PF02926.13|7.7e-12 S_Transcript_88767:3-1187(+)
PVKNSGFTHVLWGVVMGEAKIAINDGKKRRRCYLPHNKPVKRKGPIPLRPGVQGFFITCDGGRERQASHEALNVLDSFLEELIDGKEPKTDVAAIPEKPLNKKITFTYSDSSDSGEDDEDDDDNKTEGEEENKSEIPAKDDVNNESPKDGSSDHAKKDDQEHEVPSEKTAEEDKEVSKQQEDSENKESEEPPAKKKCCDNKVLESKNHVPDKKAKSVDQLIEDELKELGDKSKRRFSKLDTGCNGVVFIQMRRSQGDPSPTDIVKHMMESSARTKKHISRFLLRVLPAEVSCYASGEEISRSMKPLVERYFPVDAETPVKFAVQYDARANSGIDRMTIIDAVAKSVPGPHKVDLKNPEKTIVVQIIKTVCLVGVVEKYKELAKYNLRQLTSSHP*

Click here to download the sequence:
Link to NCBI Protein BLAST