Transcript Information: S_Transcript_88768.p1


Annotated TAIR IDAT5G12410.1
Annotated Gene NameTHUMP domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4021974-4023950 | Reverse length=376
E-Value2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.2997432665
Replicate 29.9176481905175
Replicate 310.196705046221
Condition 2: 8 Hour
Replicate 117.224353717684
Replicate 215.757095315961
Replicate 314.910845319831
Condition 3: 24 Hour
Replicate 110.607371310337
Replicate 28.9892521877339
Replicate 39.215746994177


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88768.p1 GENE.S_Transcript_88768~~S_Transcript_88768.p1 ORF type:5prime_partial len:416 (+),score=94.09,THUMP|PF02926.13|4.2e-11 S_Transcript_88768:3-1250(+)
CCAGTCAAGAATTCAGGCTTCACTCACGTTCTCTGGGGAGTCGTCATGGGCGAAGCAAAAATAGCAATCAACGATGGCAAGAAACGCAGAAGATGTTACTTACCTCATAACAAACCAGTAAAGAGGAAGGGACCAATCCCATTAAGGCCAGGAGTGCAAGGCTTCTTCATAACCTGTGATGGTGGAAGGGAACGCCAGGCTTCTCATGAAGCCCTCAATGTTCTTGACTCTTTCCTCGAAGAACTAATCGACTGGAAGGAGCCCAAGGCAGATGTTGCAGCAATACCTGAGAAACCATTGAACAAGAAGATAACATTTACGTATTCTGATTCTTCTGATAGTGGAGAAGACGATGAAGATGACGATGATAATAAAACTGAGGGGGAAGAGGAGAACAAGTCAGAAATAGATGCTAAAGATAAAGTAAATAATGAAAGTCCCAAGGATGGAAGTTCTCATCATGCAAAGAAGGATGATCAAGAGCATGAGGTTCCATCTGAGAAAACTGCTGAAGAAGATAAAGAAGTTAGTAAGCAACAGGAAGATAGCGAAAACAAGGAGAGTGAGGAACCACCAGCAAAGAAAAAATGCTGTGATAACAAAGTATTAGAAAGCAAAAATCATGTCCCTGATAAAAAAGCGAAGTCTGTTGATCAGTTAATTGAAGATGAGCTGAAGGAATTAGGAGATAAGAGCAAGAGGCGATTTTCCAAACTTGATACGGGTTGTAATGGTGTTGTCTTCATTCAAATGCGAAGAAGCCAGGGAGATCCCAGCCCGACAGATATCGTACAACACATGATGGAATCCTCGGCCAGGACAAAGAAACATATCTCTAGGTTTCTGCTTAGAGTCTTACCTGCAGAAGTCTCATGCTATGCTTCTGGGGAAGAAATCTCAAGATCCATGAAACCACTTGTTGAGCGATACTTTCCTGTTGATGCAGAGACACCGGTTAAGTTTGCAGTCCAATATGATGCTCGTGCAAATTCAGGGATTGACAGGATGACAATAATAGATGCAGTTGCAAAATCTGTTCCTGGACCGCACAAAGTGGATCTCAAAAATCCAGAGAAGACCATTGTAGTCCAAATCATTAAGACTGTATGTATGCTTGGTTGGGGTTGTGGAGAAGTACAAGGAGCTTGCGAAGTACAATTTGAGACAACTAACATCATCTCACCCGTAGCTGCACAGTACCTTGAGAGATCTGAGATAGACATCCTGAAGAGACCTTGGGAGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88768.p1 GENE.S_Transcript_88768~~S_Transcript_88768.p1 ORF type:5prime_partial len:416 (+),score=94.09,THUMP|PF02926.13|4.2e-11 S_Transcript_88768:3-1250(+)
PVKNSGFTHVLWGVVMGEAKIAINDGKKRRRCYLPHNKPVKRKGPIPLRPGVQGFFITCDGGRERQASHEALNVLDSFLEELIDWKEPKADVAAIPEKPLNKKITFTYSDSSDSGEDDEDDDDNKTEGEEENKSEIDAKDKVNNESPKDGSSHHAKKDDQEHEVPSEKTAEEDKEVSKQQEDSENKESEEPPAKKKCCDNKVLESKNHVPDKKAKSVDQLIEDELKELGDKSKRRFSKLDTGCNGVVFIQMRRSQGDPSPTDIVQHMMESSARTKKHISRFLLRVLPAEVSCYASGEEISRSMKPLVERYFPVDAETPVKFAVQYDARANSGIDRMTIIDAVAKSVPGPHKVDLKNPEKTIVVQIIKTVCMLGWGCGEVQGACEVQFETTNIISPVAAQYLERSEIDILKRPWEI*

Click here to download the sequence:
Link to NCBI Protein BLAST