Transcript Information: S_Transcript_88816.p1


Annotated TAIR IDAT2G41710.3
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17400274-17402903 | Reverse length=458
E-Value8.4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3970435628265
Replicate 27.9093019168449
Replicate 37.1086556872099
Condition 2: 8 Hour
Replicate 113.163111543459
Replicate 211.879391326216
Replicate 39.3077286037924
Condition 3: 24 Hour
Replicate 15.4170600569667
Replicate 25.8034018861267
Replicate 34.4869405141177


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88816.p1 GENE.S_Transcript_88816~~S_Transcript_88816.p1 ORF type:complete len:371 (+),score=63.64 S_Transcript_88816:1522-2634(+)
ATGGTTTTCGTGATCTGTTTTTTTTTGGGGGGGGGGGGGGATACAGGCATAGATGGACTGGCCGTTATGAAGCTCATCTTTGGGACAAAAGCACTTGGAACCAGAATCAGAATAAGAAGGGCAAACAAGGAAAACTTCATGTTTCTATGTGCTTATGATGATGAAGAAGCTGCAGCTAGAGCATATGATGTCGCTGCCTTGAAGTATTGGGGTCCAGGGACTCTTATCAACTTTCCAGTCACGGATTATAGTAGAGATCTAGAAGAAATGAAGAGTGTCTCTAGAGAGGAATATCTTGCATCACTTAGGAGAAAGAGTAGCGGCTTCTCGAGAGGGATTGCTAAATATCGTGCACTTTCCAGTGGCCGATGGGAACCATCACTTGGTCGTACAACCGGAACTGAATACCTCCACGGTATTCACTATGGTAAAGGAGAAGATCCAGCAACGGAGGGTGAATATCCCAGTGGTTTATGCATGCAAAGAAAAATTGATTTAACAGGCTACATCAAGTGGTGGGGGCCAAACAAAATTCGACCATCAGATACTCATACAAGATCATCAGAGGTACTAAGATATAGCAGCTCTGAAGATGCTGGGACTGAGCTCAAGTCATTGGAACGGGGAATCAAGTCTACGGAGCCTTACCAGATGCCTCAGTTGGGCACATCCTATGAAGTGAAGAAGAGTAAAGACTCCGCTACCTCTGCCTTGAGCATATTATCTAGGTCTGCTGCCTACAAGAACATGCTAGACAAAGCCTCTAAATCTAAGGAAACTGTTATCGACAGCGATGAAAAGGAAAACAAAAGTAACATTAGCAAGATTGACCATGGAAAGGCTGTTGAGAAAGCGAGTGATGACACTGGAATGGAGAGACTGGGACCTGCCCTGGGAGTAGGTGGGATGCCTCTTCATAAGAGCGCATTTCCTTTGTCTCCCTTACTGACTGCACCACTTCTGACGAACTACAACACTATTGATCCTTTAGCAGACCCTGTTCTTTGGACATCTTTGATGCCTGTTTTGCCTACTGCTCCTCCTCGAACTGCTGAGCTTACCAAAACCGAAACCAGCTCAACGTATAGCTTCTTTAGGCAGGAAGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88816.p1 GENE.S_Transcript_88816~~S_Transcript_88816.p1 ORF type:complete len:371 (+),score=63.64 S_Transcript_88816:1522-2634(+)
MVFVICFFLGGGGDTGIDGLAVMKLIFGTKALGTRIRIRRANKENFMFLCAYDDEEAAARAYDVAALKYWGPGTLINFPVTDYSRDLEEMKSVSREEYLASLRRKSSGFSRGIAKYRALSSGRWEPSLGRTTGTEYLHGIHYGKGEDPATEGEYPSGLCMQRKIDLTGYIKWWGPNKIRPSDTHTRSSEVLRYSSSEDAGTELKSLERGIKSTEPYQMPQLGTSYEVKKSKDSATSALSILSRSAAYKNMLDKASKSKETVIDSDEKENKSNISKIDHGKAVEKASDDTGMERLGPALGVGGMPLHKSAFPLSPLLTAPLLTNYNTIDPLADPVLWTSLMPVLPTAPPRTAELTKTETSSTYSFFRQEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST