Transcript Information: S_Transcript_88819.p1


Annotated TAIR IDAT2G41710.3
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17400274-17402903 | Reverse length=458
E-Value1.2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.720419986512
Replicate 213.032186969022
Replicate 311.978737897437
Condition 2: 8 Hour
Replicate 121.848071452357
Replicate 219.630200522113
Replicate 319.330548073145
Condition 3: 24 Hour
Replicate 19.2091175499564
Replicate 28.2767351099896
Replicate 313.600121983151


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88819.p1 GENE.S_Transcript_88819~~S_Transcript_88819.p1 ORF type:5prime_partial len:408 (-),score=77.96,AP2|PF00847.16|4.2e-13,AP2|PF00847.16|3.9e+03 S_Transcript_88819:3-1226(-)
GCGGCGGAGACGGTGAAGATGGGGACGGAGCAGAGGAGTCAAGAGAGTGGTGGGGTGGTGGTGAAGAAGGTGAAGAGAGAAAGAGGGTCGACCGCGAAAGAGAGGATCAGTAAAATGCCGCCTTGTACTGCTGGCAAGCGCAGCTCCATCTATCGCGGAGTTACCAGGCATAGATGGACTGGCCGTTATGAAGCTCATCTTTGGGACAAAAGCACTTGGAACCAGAATCAGAATAAGAAGGGCAAACAAGTTTATTTGGGTGCTTATGATGATGAGGAAGCTGCGGCTAGAGCATATGATCTCGCTGCCTTGAAGTATTGGGGTCCAGGGACTCTTATCAACTTTCCAGTCACGGATTATAGTAGAGATCTAGAAGAAATGAAGAGTGTCTCTAGAGAGGAATATCTTGCATCACTTAGGAGAAAGAGTAGCGGCTTCTCGAGAGGGATTGCTAAATATCGTGCACTTTCCAGTGGCCGATGGGAACCATCACTTGGTCGTACAACCGGAACTGAATACCTCCACTGTATTCACTATGGTAAAAGAGAAGATCCAGCAATGGAGGGTGAATATCCCAGTGGTTTATGCATGGAAAGAAAAATCGATTTAACAGGTTACATCAAGTGGTGGGGGCCAAACAAAATTCGACCATCAGATACTCATACAAGATCATCAGAGGTACTAAGATATAGCAGCTCTGAAGATGCTGGGACTGAGCTCAAGTCATTGGAACGGGGAATCAAGTCTACGGAGCCTTACCAGATGCCTCAGTTGGGCACATCCTATGAAGTGAAGAAGAATAAAGACTCCGGTACCTCTGCCTTGGGCATATTATCTAGGTCTGCTGCCTACAAGAATATGTTAGACAGAGCCTCTAAATCTAAGGAAACTGTTATCGACAGCGATGAAAAGGAAAACAAAAGTAACATTAGCAAGATTGACCATGGAAAGGCTGTTGAGAAAGCGAGTGATGACACTGGAATGGAGAGACTGGGACCTGCCCTGGGAGTAGGTGGGATGCCTCTTCATAAGAGCGCATTTCCTTTGTCTCCCTTACTGACTGCACCACTTCTGACGAACTACAACACTATTGATCCTTTAGCAGACCCTGTTCTTTGGACATCTTTGATGCCTGTTTTGCCTACTGCTCCTCCTCGAACCGCTGAGGTTACCAAAACCGAAACCAGCTCAACGTATAGCTTCTTTAGGCAGGAAGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88819.p1 GENE.S_Transcript_88819~~S_Transcript_88819.p1 ORF type:5prime_partial len:408 (-),score=77.96,AP2|PF00847.16|4.2e-13,AP2|PF00847.16|3.9e+03 S_Transcript_88819:3-1226(-)
AAETVKMGTEQRSQESGGVVVKKVKRERGSTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYSRDLEEMKSVSREEYLASLRRKSSGFSRGIAKYRALSSGRWEPSLGRTTGTEYLHCIHYGKREDPAMEGEYPSGLCMERKIDLTGYIKWWGPNKIRPSDTHTRSSEVLRYSSSEDAGTELKSLERGIKSTEPYQMPQLGTSYEVKKNKDSGTSALGILSRSAAYKNMLDRASKSKETVIDSDEKENKSNISKIDHGKAVEKASDDTGMERLGPALGVGGMPLHKSAFPLSPLLTAPLLTNYNTIDPLADPVLWTSLMPVLPTAPPRTAEVTKTETSSTYSFFRQEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST