Transcript Information: S_Transcript_88824.p1


Annotated TAIR IDAT4G15093.1
Annotated Gene Namecatalytic LigB subunit of aromatic ring-opening dioxygenase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8618454-8619472 | Forward length=269
E-Value1.7E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3578061854684
Replicate 20.67539151706678
Replicate 30.37638236905307
Condition 2: 8 Hour
Replicate 11.3056361418653
Replicate 21.1414208489656
Replicate 30.87003459612169
Condition 3: 24 Hour
Replicate 11.3374418463629
Replicate 20.69379015029635
Replicate 30.77210340015662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88824.p1 GENE.S_Transcript_88824~~S_Transcript_88824.p1 ORF type:internal len:98 (-),score=17.45,LigB|PF02900.14|3.7e-15 S_Transcript_88824:3-293(-)
GGAAGTGCCACACACAATTTGAGAACCCTTAACTTCAATGCTGACGAAGTTTCCCCTTGGGCTGTGGAGTTTGATAAGTGGCTAGAAGAAGCCCTGACGAGTGGAAGGTATGATGACGTGAATGACTTTGAAAAGAAAGCACCTCATGCAAAGAAGAGTCACCCAACGCCAGATCACTTCTACCCATTGCACGTAGCAATGGGTGCCGCTGGTGAAGACTCAAAGGCGGAGCTAATTCACCGCAGCTGGAGCCTTGGCAGTTTATCCTATGCCTCTTACAAGTTTGCCACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88824.p1 GENE.S_Transcript_88824~~S_Transcript_88824.p1 ORF type:internal len:98 (-),score=17.45,LigB|PF02900.14|3.7e-15 S_Transcript_88824:3-293(-)
GSATHNLRTLNFNADEVSPWAVEFDKWLEEALTSGRYDDVNDFEKKAPHAKKSHPTPDHFYPLHVAMGAAGEDSKAELIHRSWSLGSLSYASYKFAT

Click here to download the sequence:
Link to NCBI Protein BLAST