Transcript Information: S_Transcript_88870.p1


Annotated TAIR IDAT4G31120.1
Annotated Gene NameSHK1 binding protein 1
Annotated Gene Symbol(s)SKB1, ATPRMT5
Annotation TypeOrtholog
Chromosome Positionchr4:15132185-15136568 | Reverse length=642
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.041044851734
Replicate 29.5424948699681
Replicate 39.7022369274156
Condition 2: 8 Hour
Replicate 114.129706467794
Replicate 213.416246653578
Replicate 313.7964535112
Condition 3: 24 Hour
Replicate 17.1029375766963
Replicate 26.8825685461914
Replicate 36.2281428669075


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88870.p1 GENE.S_Transcript_88870~~S_Transcript_88870.p1 ORF type:complete len:652 (+),score=117.15,PRMT5|PF05185.12|6e-174,SAMBD|PF16950.1|2e-115 S_Transcript_88870:1101-3056(+)
ATGCCTCTAGGTGAGAATGCAGGGGACAAAAGCGAGTCCCGTTACTGCGGAGTAGAAACAGAGTTCAGCGATGACATGCCTCATCTCCTTCATCTCAACATCAATGGCGGCTTCGATTTCGTCCTTGCTCCTTTGGTGGACCCTGCCTATAGGCCTAGTGCACAAACTTCTGGTGATAGGAGTCTTGGTGCTCTCCCTGTTGCCGGTTCAGACTTGGTTTTAAGTCCTGCCCAGTGGAGTAGTCATGTTGTTGGGAAAATCAGCTCGTGGATTGATTTGGATTCTGATGATGAAATACTTCGGAGGGATTCTGAGATCAGCCTGAAGCAAGAAATAGCTTGGGCTTCTCATCTCTCACTGCAGGCATGCCTTCTCCCAACCCCTAGAGGTTCTTCATGTGCCAACTATGCGAGGTGTGTGAATCAGATTCTACAAAGCTCAAACAACATGCAGTTGTGGCTCAGGATTCCCTTAAGGAAGCAGGAGGATGGTGAGCATATGGAAGATCAGTCTCTGGGGGGAGATCCCATTGATTCGTGGGAGACATGGAACTCATTTCGTCTTCTCTGTGAACATAATAGTCAACTTTCAGTTGCTCTGGATGTCCTGAGTACACTCCCTTCTACAAATTCTTTAGGGCGGTGGTTTGGAGAGCCAGTACGAGCAGCAATTGTACACTCTAATTCTTTTCTTACAAATGCTTGTGGATACCCATGCTTATCAAAGCGCCATCAGAAACTAGTCACGACTTTCTTTAACTATTCTGTACAGGTAGTCATTTCTGGAGAAGTGGCACATAATATTCCATTAAGAACATCAGAGTTGGCTGCCAATAATGCTAGTAATCATGTTAATAGTAGTCAGAATCATCCTCTGAGACCATATTTGGACTACATTGGTTATCTATTCCAAAAGATGGATCCGCTCCCTGAGCAAGAGCGGTTTGAGCTTGGTTATAGGGATTTTCTGCAATCACCTTTGCAACCTCTCATGGATAACCTCGAGGCACAGACCTATGAGACATTTGAAAAGGATGCAGTAAAATACATCCAGTATCAAAGGGCTGTCAGTAAAGCTTTGATGGATAGAGTTTCTGATGACAATGCTTCAACTGTGACCACTGTGCTGATGGTTGTTGGAGCTGGACGTGGACCTCTAGTCAGAGCGTCGCTGCAGGCTGCTGAGGAAACAGGCAGAAAGTTGAAAGTTTATGCTGTGGAGAAGAATCCTAACGCTGTGATTACTCTTCATAGCTTGGTTAAACTTGAAGGATGGGAGAATGTTGTGACCATAGTATCCAGTGACATGCGTTGCTGGGATGCTCCTGAGAAGGCTGACATATTGGTTAGCGAGTTGTTGGGTTCATTTGGTGACAATGAGCTTTCTCCTGAGTGTCTTGATGGAGCCCAAAGATTTCTGAAGCCAGATGGCATCTCCATACCATCATCCTACACGAGTTTTCTTCAACCAATTACTACAACAAAATTGTATAATGATGTTAAGGCACATAAAGATCTAGTGCACTTTGAAACTGCTTATGTCGTTAAACTGCACAAAGTAGCAAGGCTTGCTCCTTCTAAGCCCGTTTTCACTTTTGACCATCCAAATAATTCACACAACAAAGACAATAAGCGTTATACGAAGCTGACATTTGACTTACCAAGTGATACTGGATCAGCATTGGTGCATGGATTTGCAGGATACTTTGATGCAACTCTCTACAAAGATGTACATCTTGGTATAGAGCCAACTATGCCAACACCCAATATGTTCAGTTGGTTTCCAATCTATTTCCCACTGAGAACACCAGTGTGTGTAAGGCCAGACTCCCCTCTAGAATTTCATATCTGGCGATGCTGTGGTCCCACTAAGGTTTGGTATGAATGGTGTGTCGCATCTCCTTCCCCATCTCCAATTCACAATAGCAATGGTCGTTCATACTGGGTCGGTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88870.p1 GENE.S_Transcript_88870~~S_Transcript_88870.p1 ORF type:complete len:652 (+),score=117.15,PRMT5|PF05185.12|6e-174,SAMBD|PF16950.1|2e-115 S_Transcript_88870:1101-3056(+)
MPLGENAGDKSESRYCGVETEFSDDMPHLLHLNINGGFDFVLAPLVDPAYRPSAQTSGDRSLGALPVAGSDLVLSPAQWSSHVVGKISSWIDLDSDDEILRRDSEISLKQEIAWASHLSLQACLLPTPRGSSCANYARCVNQILQSSNNMQLWLRIPLRKQEDGEHMEDQSLGGDPIDSWETWNSFRLLCEHNSQLSVALDVLSTLPSTNSLGRWFGEPVRAAIVHSNSFLTNACGYPCLSKRHQKLVTTFFNYSVQVVISGEVAHNIPLRTSELAANNASNHVNSSQNHPLRPYLDYIGYLFQKMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALMDRVSDDNASTVTTVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVITLHSLVKLEGWENVVTIVSSDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFLQPITTTKLYNDVKAHKDLVHFETAYVVKLHKVARLAPSKPVFTFDHPNNSHNKDNKRYTKLTFDLPSDTGSALVHGFAGYFDATLYKDVHLGIEPTMPTPNMFSWFPIYFPLRTPVCVRPDSPLEFHIWRCCGPTKVWYEWCVASPSPSPIHNSNGRSYWVGL*

Click here to download the sequence:
Link to NCBI Protein BLAST