Transcript Information: S_Transcript_88872.p1


Annotated TAIR IDAT4G31120.1
Annotated Gene NameSHK1 binding protein 1
Annotated Gene Symbol(s)SKB1, ATPRMT5
Annotation TypeOrtholog
Chromosome Positionchr4:15132185-15136568 | Reverse length=642
E-Value7.5E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86970592271832
Replicate 21.297811150442
Replicate 31.6273002426706
Condition 2: 8 Hour
Replicate 11.1498984974925
Replicate 21.5353229458636
Replicate 31.4976821029644
Condition 3: 24 Hour
Replicate 10.17847127034799
Replicate 20.18516185928388
Replicate 31.0715247623088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88872.p1 GENE.S_Transcript_88872~~S_Transcript_88872.p1 ORF type:complete len:612 (+),score=110.86,PRMT5|PF05185.12|1.6e-128,SAMBD|PF16950.1|1.7e-115 S_Transcript_88872:1101-2936(+)
ATGCCTCTAGGTGAGAATGCAGGGGACAAAAGCGAGTCCCGTTACTGCGGAGTAGAAACAGAGTTCAGCGATGACATGCCTCATCTCCTTCATCTCAACATCAATGGCGGCTTCGATTTCGTCCTTGCTCCTTTGGTGGACCCTGCCTATAGGCCTAGTGCACAAACTTCTGGTGATAGGAGTCTTGGTGCTCTCCCTGTTGCCGGTTCAGACTTGGTTTTAAGTCCTGCCCAGTGGAGTAGTCATGTTGTTGGGAAAATCAGCTCGTGGATTGATTTGGATTCTGATGATGAAATACTTCGGAGGGATTCTGAGATCAGCCTGAAGCAAGAAATAGCTTGGGCTTCTCATCTCTCACTGCAGGCATGCCTTCTCCCAACCCCTAGAGGTTCTTCATGTGCCAACTATGCGAGGTGTGTGAATCAGATTCTACAAAGCTCAAACAACATGCAGTTGTGGCTCAGGATTCCCTTAAGGAAGCAGGAGGATGGTGAGCATATGGAAGATCAGTCTCTGGGGGGAGATCCCATTGATTCGTGGGAGACATGGAACTCATTTCGTCTTCTCTGTGAACATAATAGTCAACTTTCAGTTGCTCTGGATGTCCTGAGTACACTCCCTTCTACAAATTCTTTAGGGCGGTGGTTTGGAGAGCCAGTACGAGCAGCAATTGTACACTCTAATTCTTTTCTTACAAATGCTTGTGGATACCCATGCTTATCAAAGCGCCATCAGAAACTAGTCACGACTTTCTTTAACTATTCTGTACAGGTAGTCATTTCTGGAGAAGTGGCACATAATATTCCATTAAGAACATCAGAGTTGGCTGCCAATAATGCTAGTAATCATGTTAATAGTAGTCAGAATCATCCTCTGAGACCATATTTGGACTACATTGGTTATCTATTCCAAAAGATGGATCCGCTCCCTGAGCAAGAGCGGTTTGAGCTTGGTTATAGGGATTTTCTGCAATCACCTTTGCAACCTCTCATGGATAACCTCGAGGCACAGACCTATGAGACATTTGAAAAGGATGCAGTAAAATACATCCAGTATCAAAGGGCTGTCAGTAAAGCTTTGATGGATAGAGTTTCTGATGACAATGCTTCAACTGTGACCACTGTGCTGATGGTTGTTGGAGCTGGACGTGGACCTCTAGTCAGAGCGTCGCTGCAGGCTGCTGAGGAAACAGGCAGAAAGTTGAAAGTTTATGCTGTGGAGAAGAATCCTAACGCTGTGATTACTCTTCATAGCTTGGTTAAACTTGAAGGATGGGAGAATGTTGTGACCATAGTATCCAGTGACATGCGTTGCTGGGATGCTCCTGAGAAGGCTGACATATTGGTTAGCGAGTTGTTGGGTTCATTTGGTGACAATGAGCTTTCTCCTGAGTGTCTTGATGGAGCCCAAAGATTTCTGAAGCCAGATGGCATCTCCATACCATCATCCTACACGAGTTTTCTTCAACCAATTACTACAACAAAATTGTATAATGATGTTAAGGCACATAAAGATCTAGTGCACTTTGAAACTGCTTATGTCGTTAAACTGCACAAAGTAGCAAGGCTTGCTCCTTCTAAGCCCGTAAGTCCCCCTCACCCCCTGCTGCTGAAAGGAATAGAAAAGGGGAAAAAAGCCAAGCAATGGCCTTCTTTGGCTGTGCTTTTTCTGTGGCTGATGCAATGTTGTCTTGTCCTGTGCCATCTTTTATTGTCTAAAGAAATTTGTGATTTGTGTGTGTTAATGGGTTTTTCCAATGTTGACATTCACAGGTTTTCACTTTTGACCATCCAAATAATTCACACAACAAAGACAATAAGCGTTATACGAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88872.p1 GENE.S_Transcript_88872~~S_Transcript_88872.p1 ORF type:complete len:612 (+),score=110.86,PRMT5|PF05185.12|1.6e-128,SAMBD|PF16950.1|1.7e-115 S_Transcript_88872:1101-2936(+)
MPLGENAGDKSESRYCGVETEFSDDMPHLLHLNINGGFDFVLAPLVDPAYRPSAQTSGDRSLGALPVAGSDLVLSPAQWSSHVVGKISSWIDLDSDDEILRRDSEISLKQEIAWASHLSLQACLLPTPRGSSCANYARCVNQILQSSNNMQLWLRIPLRKQEDGEHMEDQSLGGDPIDSWETWNSFRLLCEHNSQLSVALDVLSTLPSTNSLGRWFGEPVRAAIVHSNSFLTNACGYPCLSKRHQKLVTTFFNYSVQVVISGEVAHNIPLRTSELAANNASNHVNSSQNHPLRPYLDYIGYLFQKMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALMDRVSDDNASTVTTVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVITLHSLVKLEGWENVVTIVSSDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFLQPITTTKLYNDVKAHKDLVHFETAYVVKLHKVARLAPSKPVSPPHPLLLKGIEKGKKAKQWPSLAVLFLWLMQCCLVLCHLLLSKEICDLCVLMGFSNVDIHRFSLLTIQIIHTTKTISVIRS*

Click here to download the sequence:
Link to NCBI Protein BLAST