Transcript Information: S_Transcript_88876.p2


Annotated TAIR IDAT4G31120.1
Annotated Gene NameSHK1 binding protein 1
Annotated Gene Symbol(s)SKB1, ATPRMT5
Annotation TypeOrtholog
Chromosome Positionchr4:15132185-15136568 | Reverse length=642
E-Value2.3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.320833905176
Replicate 210.00996933628
Replicate 39.0506019669521
Condition 2: 8 Hour
Replicate 114.019469560337
Replicate 217.193179973123
Replicate 315.789516744431
Condition 3: 24 Hour
Replicate 15.6634883123763
Replicate 24.6167023581448
Replicate 38.8744230314297


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88876.p2 GENE.S_Transcript_88876~~S_Transcript_88876.p2 ORF type:complete len:108 (+),score=4.26,PRMT5|PF05185.12|4.4e-30 S_Transcript_88876:3164-3487(+)
ATGTTTTCACATTTCTTTTTGTTGATCCAGTACATTCTGTCTGCACTTTTTTTGGCAGGATTTGCAGGATACTTTGATGCAACTCTCTACAAAGATGTACATCTTGGTATAGAGCCAACTATGCCAACACCCAATATGTTCAGTTGGTTTCCAATCTATTTCCCACTGAGAACACCAGTGTGTGTAAGGCCAGACTCCCCTCTAGAATTTCATATCTGGCGATGCTGTGGTCCCACTAAGGTTTGGTATGAATGGTGTGTCGCATCTCCTTCCCCATCTCCAATTCACAATAGCAATGGTCGTTCATACTGGGTCGGTCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88876.p2 GENE.S_Transcript_88876~~S_Transcript_88876.p2 ORF type:complete len:108 (+),score=4.26,PRMT5|PF05185.12|4.4e-30 S_Transcript_88876:3164-3487(+)
MFSHFFLLIQYILSALFLAGFAGYFDATLYKDVHLGIEPTMPTPNMFSWFPIYFPLRTPVCVRPDSPLEFHIWRCCGPTKVWYEWCVASPSPSPIHNSNGRSYWVGL*

Click here to download the sequence:
Link to NCBI Protein BLAST