Transcript Information: S_Transcript_88992.p1


Annotated TAIR IDAT5G27920.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9942063-9944507 | Reverse length=642
E-Value7.9E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5967809245019
Replicate 26.8200276839304
Replicate 36.6986753935798
Condition 2: 8 Hour
Replicate 16.9876085737746
Replicate 26.1548517123205
Replicate 35.4360353242997
Condition 3: 24 Hour
Replicate 15.874821835183
Replicate 26.3402625893646
Replicate 34.8339003187549


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_88992.p1 GENE.S_Transcript_88992~~S_Transcript_88992.p1 ORF type:complete len:647 (+),score=79.71,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|45,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|9.2,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|0.68,LRR_4|PF12799.3|92,LRR_4|PF12799.3|32,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|3.8,LRR_6|PF13516.2|45,LRR_6|PF13516.2|1.5e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|3.7e+03,LRR_6|PF13516.2|1.1e+03,LRR_6|PF13516.2|30,LRR_6|PF13516.2|2.2e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|69,LRR_6|PF13516.2|8.8,LRR_6|PF13516.2|1.4e+03,LRR_6|PF13516.2|7.4,LRR_6|PF13516.2|2.3,LRR_6|PF13516.2|1.5,LRR_6|PF13516.2|2.8e+03 S_Transcript_88992:250-2190(+)
ATGACCCAACACCTTGAACAAAGTTGTTCACTAATCCTAACACTTCTCACAGAAGACCTCCTCACCCGAATCCACACCCTCATAACCCACCCACCCGACCTCAAATCCTTCCGCCTTGTCTGCCGCTCTTTCCACCACATCGACACCCTTACCCGAACCCACCTCCGCCCCCTCCGACCCGAATTCCTCCCTTCCCTCCTCTCCAAATTCCCATCCCTCAAATCCCTCGACCTCTCCGCTTGCCCTCGTCTCGACGACTCTCTCATCACCTCCCTTACCTTCCCCCCTTCTCTCACCTCCCTCGGCCTCTGCCGGGCCACCAACCTAACCCGCGTGGGCCTACATGCTCTCATCCGCGCTTGTGGTCCCACCTCCCTCCATGTCATCGACGCCTCGTACTGGTGCCGCCGCTTCGGCGACCTCGAAGCCCAGGCCTTGTCCTTCGCTGTTGGACTCAGGGAGCTTCGTTTAGACAAGTCCTTGAACCTCACCGATGTGGGCCTGGCCCAGGTTGCAGTCGCCTGTGTTGGGCTTGAGAGGCTCAGCTTGAAATGGTGTATGGAGATCACTGACCTTGGGATTGATTTGCTCACTAAAAAATGCCTTAAGTTGCGGTTTCTAGATGTTTCGTATCTTAACATTAGTAGTGAGTCTTTAAGTTCGATTTCTAGTATGAATATGCTGGAGAGTTTGGTCATGCTTGGGTGTTCCTCTGTTGATGATTCTGGCTTGCACTTTCTTGCCTCCGGATGCCCTTCTCTCAAGGTATTGGATATATCAAGGTGTGATTCTGTCACTTCTGCCGGGTTATGCTCAGTGGTTAAAGGACATTCTGGTCTTCAGCAGATAATTGCTAGCCATTGTATGGTCGATCTCACTGCTGCTCTACTTCGTGCATTAAAGAGCTTGAAACATCTGAATGTGTTCAGAGCTGATAAAGCTCGAGTTTCTAAATCCACCTTCCAGATCATCAGCGCTGCATGCAGGTCTCTGGTTGAGATTGGACTCAGCAAGTGCCAAGGACTGAGAGATGTTGGCATTGTATGGCTAGTAACCGGCTGTGTCAACCTGAATAGTCTCAACCTTTCATGTTGTGATTCTGTTACGGATGCAGCAATTGCAGCCATAGCGAGCTCATGTAGAAAACTCCATTGCTTGAAGTTGGAGTCCTGTAGTTCCATAACTGAAAGGAGCCTTGAACTGCTCGGCTCTTACTGTCCTCTGCTCGAGGAGCTTGATCTCACAGATTGCCATGGCATAAATGATACAGCTCTCAAATACTTGTCTGGTTGCTCCGAGCTTAAATTCCTGAAATTAGGACTTTGCAACAATATATCAGGAAAAGGATTGCGCTATATTGCTTCCAAGTGCTCTAAGATCTGTGAACTTGATTTATATCGCTGTCCTCATGTTGGAGATGATGGAATGGCTGCTTTGTCAAACGGCTGCAAGAACATCAAGAAGCTGAACGTCTCATATTGCAATAGCCTCACCGATAAGGGGATGGAGTACATCAGTAAACTGGAGGAATTGTCTGACCTGGAGATGCGTGGGCTTGAGAGCATCACTGGTGTTGGCTTGCAAGCTGTTGCAGTTGGGTGCAAGAGACTGACTGAATTAGATTTGAAACACTGTGAGAATATTCAAGATTCCGGTTTTTGGGCTCTTGCCTACTACTCCAAAAACATTCGCCAGCTGAACTTGGGCTATTGTGCTATCTCAGATGTTGCATTATGGATGTTGATGAGCAACCTTACTTGCCTTCAGAATGTAAATGCAGTTCAACTTGCTAATGTATCGGTGGGAGGATTTGAACTTGCACTCAGGGCTTGTTGTATCCAACTTAAAAAGGTGAAATTACAATACTTCCTGAAGTTCTCCCTTTCTCAGGAAGTACTTAAGTTTCTATGGTCAAGAGGGTGCAAAGTTAGATGGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_88992.p1 GENE.S_Transcript_88992~~S_Transcript_88992.p1 ORF type:complete len:647 (+),score=79.71,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|45,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|9.2,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|0.68,LRR_4|PF12799.3|92,LRR_4|PF12799.3|32,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|3.8,LRR_6|PF13516.2|45,LRR_6|PF13516.2|1.5e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|3.7e+03,LRR_6|PF13516.2|1.1e+03,LRR_6|PF13516.2|30,LRR_6|PF13516.2|2.2e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|69,LRR_6|PF13516.2|8.8,LRR_6|PF13516.2|1.4e+03,LRR_6|PF13516.2|7.4,LRR_6|PF13516.2|2.3,LRR_6|PF13516.2|1.5,LRR_6|PF13516.2|2.8e+03 S_Transcript_88992:250-2190(+)
MTQHLEQSCSLILTLLTEDLLTRIHTLITHPPDLKSFRLVCRSFHHIDTLTRTHLRPLRPEFLPSLLSKFPSLKSLDLSACPRLDDSLITSLTFPPSLTSLGLCRATNLTRVGLHALIRACGPTSLHVIDASYWCRRFGDLEAQALSFAVGLRELRLDKSLNLTDVGLAQVAVACVGLERLSLKWCMEITDLGIDLLTKKCLKLRFLDVSYLNISSESLSSISSMNMLESLVMLGCSSVDDSGLHFLASGCPSLKVLDISRCDSVTSAGLCSVVKGHSGLQQIIASHCMVDLTAALLRALKSLKHLNVFRADKARVSKSTFQIISAACRSLVEIGLSKCQGLRDVGIVWLVTGCVNLNSLNLSCCDSVTDAAIAAIASSCRKLHCLKLESCSSITERSLELLGSYCPLLEELDLTDCHGINDTALKYLSGCSELKFLKLGLCNNISGKGLRYIASKCSKICELDLYRCPHVGDDGMAALSNGCKNIKKLNVSYCNSLTDKGMEYISKLEELSDLEMRGLESITGVGLQAVAVGCKRLTELDLKHCENIQDSGFWALAYYSKNIRQLNLGYCAISDVALWMLMSNLTCLQNVNAVQLANVSVGGFELALRACCIQLKKVKLQYFLKFSLSQEVLKFLWSRGCKVRWD*

Click here to download the sequence:
Link to NCBI Protein BLAST