Transcript Information: S_Transcript_89016.p1


Annotated TAIR IDAT4G38430.1
Annotated Gene Namerho guanyl-nucleotide exchange factor 1
Annotated Gene Symbol(s)ATROPGEF1, ROPGEF1
Annotation TypeOrtholog
Chromosome Positionchr4:17986643-17988659 | Forward length=548
E-Value9.6E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.527980429075
Replicate 28.5262573190396
Replicate 37.1272725103954
Condition 2: 8 Hour
Replicate 111.129984587826
Replicate 27.9326475256401
Replicate 37.4732852160891
Condition 3: 24 Hour
Replicate 15.744072949718
Replicate 26.4108789717955
Replicate 36.2301464267617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89016.p1 GENE.S_Transcript_89016~~S_Transcript_89016.p1 ORF type:complete len:251 (+),score=61.82,PRONE|PF03759.9|6e-108 S_Transcript_89016:111-755(+)
ATGGAGATGATGAAGGAAAGGTTTGCAAAACTTTTGCTAGGAGAAGACATGTCTGGCGGTGGGAAAGGGGTTTGTACTGCACTTGCCATCTCCAATGCTATAACCAATCTTGCTGCCACTGTATTTGGGGAGCTTTGGAGATTAGAGCCATTGGCGCCTCAGAAGAAGAACATGTGGTGCAGAGAAATGGAGTGGCTCTTATGTGTTAGCGATTCAATTGTGGAACTGGTCCCTTCCGTGCAAGAGTTTCCTGGTGGAGGCACCTTCGAGGTCATGGCCACCAGGCCTAGATCTGATTTGTATGTAAACCTCCCTGCCCTTAAGAAACTTGACACCATGCTGCTTAGTTTGCTTGATGGCTTCCGAGATACTGAGTTCTGGTATGCAGACCGTGAGGGTATTGATCGCGACCCTCTTCAAGCAGCTATTTGCTCTGGTCGCCCCTCTGTTCGTCAGGAGGATAAGTGGTGGTTGCCTTGTCCTAAAGTTCCTCCCAATGGCTTGTCTGACGAGGCACGCAAGAGGTTGCAACAATGTAGGGACTGTACAAACCAGATTCTAAAGGCTGCTATGGCTATTAATAATAGTGTTATTGCTGAGATGGAGATTCCTTGCACTTATTTGGAGACCTTGCCCAAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89016.p1 GENE.S_Transcript_89016~~S_Transcript_89016.p1 ORF type:complete len:251 (+),score=61.82,PRONE|PF03759.9|6e-108 S_Transcript_89016:111-755(+)
MEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLAATVFGELWRLEPLAPQKKNMWCREMEWLLCVSDSIVELVPSVQEFPGGGTFEVMATRPRSDLYVNLPALKKLDTMLLSLLDGFRDTEFWYADREGIDRDPLQAAICSGRPSVRQEDKWWLPCPKVPPNGLSDEARKRLQQCRDCTNQILKAAMAINNSVIAEMEIPCTYLETLPKA*

Click here to download the sequence:
Link to NCBI Protein BLAST