Transcript Information: S_Transcript_89019.p1


Annotated TAIR IDAT4G38430.1
Annotated Gene Namerho guanyl-nucleotide exchange factor 1
Annotated Gene Symbol(s)ATROPGEF1, ROPGEF1
Annotation TypeOrtholog
Chromosome Positionchr4:17986643-17988659 | Forward length=548
E-Value2.9E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.207429277246
Replicate 216.179379008844
Replicate 312.997737811299
Condition 2: 8 Hour
Replicate 111.576640457872
Replicate 214.488435309537
Replicate 314.210565069988
Condition 3: 24 Hour
Replicate 112.690837075488
Replicate 211.439828700442
Replicate 312.01049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89019.p1 GENE.S_Transcript_89019~~S_Transcript_89019.p1 ORF type:5prime_partial len:105 (+),score=27.05,PRONE|PF03759.9|3.7e-22 S_Transcript_89019:3-317(+)
CAACAGCAGCAACAATTCCCTATCCCTGCTGTCGACCAGAAAGTTTCGATGTTCTATGTTGAGAACCTTATCTCATACTCATTCTTCCTTAAATATCATCATCTAGAAATGGAGATGATGAAGGAAAGGTTTGCAAAACTTTTGCTAGGAGAAGACATGTCTGGCGGTGGGAAAGGGGTTTGTACTGCACTTGCCATCTCCAATGCTATAACCAATCTTGCTGATTCCTTGCACTTATTTGGAGACCTTGCCCAAGGCTTGATAACTGTTGAACTGTTCAAGGAAGGATCTGCAGAAGTTGTGAGTGAATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89019.p1 GENE.S_Transcript_89019~~S_Transcript_89019.p1 ORF type:5prime_partial len:105 (+),score=27.05,PRONE|PF03759.9|3.7e-22 S_Transcript_89019:3-317(+)
QQQQQFPIPAVDQKVSMFYVENLISYSFFLKYHHLEMEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLADSLHLFGDLAQGLITVELFKEGSAEVVSES*

Click here to download the sequence:
Link to NCBI Protein BLAST