Transcript Information: S_Transcript_89303.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6227122100246
Replicate 22.6567757058787
Replicate 30.9655882766283
Condition 2: 8 Hour
Replicate 11.5631176148684
Replicate 21.5226912686725
Replicate 32.4552285199455
Condition 3: 24 Hour
Replicate 11.3724534130216
Replicate 21.7798804902891
Replicate 32.2448940046438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89303.p1 GENE.S_Transcript_89303~~S_Transcript_89303.p1 ORF type:complete len:191 (+),score=11.28,PIF1|PF05970.10|3.3e-27 S_Transcript_89303:288-860(+)
ATGCCAACTTTCTTTGTGAATTTGGTGTACCCTGATCTTCGTCAGCTTGCAGCTCATCCACATGCATTTAGCTCACGTGCAACACTAACTCCAACAAATGATGAGGTTGAATGCATTAATAAATTAGTGATCGACAATTTCCCGGGTGAGGCATCCACTTACAAAAGCTATGACAACACTGTAGACGATGATTGTAATGCTCACCCAGTGGAGTTTTTGAATACACTATGCCCAGGGGGAATGAGTCCACACAACTTGACGTTAAAATTGAACTGCCCAATCATGTTACTAAGCAATCTCAATCCATCCGTTGGACTTTGCAATGGAACTAGGCTCATAGTCAGGGGTTTTAAGCCCAATCTGGTTTTGTGTGAGATAACAACAGGATATCATGCTGGTGACTATGTCTTCATTCCACGAATTAGTTTAGCACCATCAAGCTCCATCACATATCCATATAGATTTGAAAGACGGCAGTTTCCAATCAAACTTTGTTTCGCAATGACAATCAATAAGTCTCAGGGCCAAAATTTTAGTATTATTACAATTACAAAAATTCTTTTCGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89303.p1 GENE.S_Transcript_89303~~S_Transcript_89303.p1 ORF type:complete len:191 (+),score=11.28,PIF1|PF05970.10|3.3e-27 S_Transcript_89303:288-860(+)
MPTFFVNLVYPDLRQLAAHPHAFSSRATLTPTNDEVECINKLVIDNFPGEASTYKSYDNTVDDDCNAHPVEFLNTLCPGGMSPHNLTLKLNCPIMLLSNLNPSVGLCNGTRLIVRGFKPNLVLCEITTGYHAGDYVFIPRISLAPSSSITYPYRFERRQFPIKLCFAMTINKSQGQNFSIITITKILFDF*

Click here to download the sequence:
Link to NCBI Protein BLAST