Transcript Information: S_Transcript_89341.p1


Annotated TAIR IDAT5G60600.1
Annotated Gene Name4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Annotated Gene Symbol(s)GCPE, ISPG, CSB3, CLB4, HDS
Annotation TypeOrtholog
Chromosome Positionchr5:24359447-24363274 | Forward length=741
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 160.100593787472
Replicate 266.447422953063
Replicate 368.645957007844
Condition 2: 8 Hour
Replicate 152.082362261804
Replicate 255.601267656463
Replicate 356.856164942445
Condition 3: 24 Hour
Replicate 178.786928127525
Replicate 279.655979630372
Replicate 372.655282513368


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89341.p1 GENE.S_Transcript_89341~~S_Transcript_89341.p1 ORF type:complete len:511 (+),score=105.22,GcpE|PF04551.10|2.2e-102 S_Transcript_89341:1051-2583(+)
ATGCGAATAGGGACAAATCATGGAAGTCTTTCAGATCGTATAATGAGCTATTATGGGGATTCTCCCCGCGGAATGGTTGAATCTGCATTTGAGTTCGCGAGGATATGCCGGAAGATGGACTACCATAATTTTGTTTTTTCCATGAAAGCAAGCAATCCAGTTGTAATGGTTGAAGCTTATCGGTTATTGGTAGCAGAAATGTATTTGCAAGGGTGGGATTATCCATTACACTTGGGAGTAACAGAAGCTGGTGAAGGAGAAGATGGACGAATGAAATCTGCAATCGGGATTGGGACCCTTCTTCAGGATGGTTTGGGGGATACAATTAGGGTCTCCCTCACTGAAGCACCGGAGGAGGAGATAGATCCCTGCAGAAGGCTGGCCAACCTTGGTAGCAGAGCAGCTGAACTTCAACAAGGAGTGGCACCATTTGAAGAAAAACATAGACATTACTTTGAGTTTCAACGCAGAACTGGTGATTTACCTAGTCAGAAACAGGGTGAGGAAGTGGACTATAGAGGGGTCCTACACCGTGATGGTTCTGTTCTCATGACTGTTTCCTTGGACCAGTTGAAGACACCTGAACTCCTATACAAGTCATTAGCAGCAAAGCTTGTTGTTGGCATGCCTTTTAAGGATCTGGCTACTGTAGACTCCATTCTACTGAAGGAGCTCCCACCAGCAGATGATGCTAATGCTAGATTAGCCCTCAAGAGGTTGATAGATATAAGCATGGGTGTCATCGCGCCTTTGTCTGAGCAACTGACAAAGCCCTTGCCCAATGCAATTGCTTTGGTGAACCTTAAGGAGATTTCTACTGGTGCATACAAGCTTTTACCAGAAGGAACCCGCTTAGCAGTATCAATTAGAGGTGATGAACCCTATGAAGAGCTTGAAATCCTCAAAGATGTAGATGCTACAATGCTTCTGCATGATCTGCCTTGTACTGAAGAGAAAACAAGTAGGGTGCATGCAGCACGAAGGCTATTTGAGTACCTATCAGACAATTCCAATTCTCTAAACTTCCCTGTAATTCACCATATCAAGTTCCCCTCAGGGACCCACAGGGACGATTTAGTGATTCGTGCTGGTACCTATGCTGGAGCCCTTCTTGTCGATGGACTAGGAGATGGTGTTCTTTTGGAGGCTCCTGACCAAGAGTTTGAGTTTCTGAGAAATTCATCTTTTAACTTGCTTCAGGGTTGCAGAATGCGGAATACCAAAACGGAATATGTCTCATGTCCATCTTGTGGAAGGACACTGTTTGATCTCCAAGAAGTAAGCGCACAAATACGAGAGAAGACATCACATTTACCTGGTGTTTCTATTGCAATAATGGGTTGCATTGTGAATGGTCCTGGGGAAATGGCTGATGCGGACTTTGGATATGTCGGCGGTGCTCCTGGAAAAATTGACTTATATGTAGGCAAGACGGTGGTGAAGCGAGGAATTGCAATGGAGCAAGCTACAGATGCATTGATCGACCTAATTAAAGAACATGGACGGTGGGTGGATCCTCCGGAGGAAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89341.p1 GENE.S_Transcript_89341~~S_Transcript_89341.p1 ORF type:complete len:511 (+),score=105.22,GcpE|PF04551.10|2.2e-102 S_Transcript_89341:1051-2583(+)
MRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKMDYHNFVFSMKASNPVVMVEAYRLLVAEMYLQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRLANLGSRAAELQQGVAPFEEKHRHYFEFQRRTGDLPSQKQGEEVDYRGVLHRDGSVLMTVSLDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLKELPPADDANARLALKRLIDISMGVIAPLSEQLTKPLPNAIALVNLKEISTGAYKLLPEGTRLAVSIRGDEPYEELEILKDVDATMLLHDLPCTEEKTSRVHAARRLFEYLSDNSNSLNFPVIHHIKFPSGTHRDDLVIRAGTYAGALLVDGLGDGVLLEAPDQEFEFLRNSSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIDLIKEHGRWVDPPEEE*

Click here to download the sequence:
Link to NCBI Protein BLAST