Transcript Information: S_Transcript_89614.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value9.1E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.087989725416
Replicate 267.275970974675
Replicate 368.900503467254
Condition 2: 8 Hour
Replicate 163.825992146349
Replicate 269.793865826753
Replicate 363.347096403536
Condition 3: 24 Hour
Replicate 169.919010890669
Replicate 260.889043073074
Replicate 362.611060935235


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89614.p1 GENE.S_Transcript_89614~~S_Transcript_89614.p1 ORF type:complete len:284 (+),score=40.08,zf-CCHC|PF00098.19|2.8e-06,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|1.6e-06,zf-CCHC|PF00098.19|3e-05,zf-CCHC|PF00098.19|0.009,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC|PF00098.19|0.0025,zf-CCHC|PF00098.19|0.00044,zf-CCHC|PF00098.19|6e-05,zf-CCHC_3|PF13917.2|0.054,zf-CCHC_3|PF13917.2|0.4,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.92,zf-CCHC_3|PF13917.2|0.011,zf-CCHC_3|PF13917.2|0.16,zf-CCHC_3|PF13917.2|1.8e+02,zf-CCHC_3|PF13917.2|0.53,zf-CCHC_3|PF13917.2|2.5e-05,zf-CCHC_4|PF14392.2|1.4,zf-CCHC_4|PF14392.2|0.23,zf-CCHC_4|PF14392.2|8.6,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|12,zf-CCHC_4|PF14392.2|6.2,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|1.2,zf-CCHC_4|PF14392.2|2.6,zf-CCHC_2|PF13696.2|0.0037,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|48,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|4.7,zf-CCHC_2|PF13696.2|0.39,zf-CCHC_2|PF13696.2|0.031,zf-CCHC_2|PF13696.2|1.7e+03,zf-CCHC_2|PF13696.2|8.3 S_Transcript_89614:325-1176(+)
ATGAGTTCTCGCAGCCAGAGCAGCAGCCACAGCAGGAGCAGAAGCAGGAGCCGTAGCAGGAGCAGGAGTCCCCGAGATCGTCGGATACGATCTCAGCGCTATTCCTTTCGTGACGCTCCATATAGGAGGGAGGGGCGTCGGGGTTTCAGCCAAAACAATCTTTGCAACAACTGCAAGCGACCTGGTCACTTTGCCAGAGAGTGTCCGAATGTTGCTGTCTGTAACAACTGTGGGCTTCCGGGGCATATTGCAGCGGAATGCACTACAAAATCATTATGCTGGAACTGTCGAGAGCCGGGGCACATGGCCAGCAACTGCCCAAATGAGGGCATCTGCCATTCATGTGGCAAGGCTGGTCACCGTGCTAGAGAATGCCCAAACCCAGAACTCCCACCTGGGGATCTGAGATTATGTAACAACTGCTTTAAGCAGGGTCATATGGCTGCAGAGTGCACAAATGACAAGGCATGTAAGAATTGCAGGAAGACAGGCCACCTAGCTCGTGACTGCCAGAATGAGCCTGTTTGTAACTTGTGCAATATAGCTGGACATGTGGCCAGGCAATGCCCAAAGGCTGACATTCTTGGAGACCGGGGAAGTGGTGGAGGTGGTGGAGTCGGTGGTGGGCACCGTTATGGTGGGTTTGGTGGCGGAGGTGGTTTCGGTGGTTATCCTGTTGGTGGTGGTTACCGTGATATAGTCTGTCGGAGCTGCGGACATTTGGGCCATATGAGCAGAGAATGCATGGGCGCACCTCCTATGATTATCTGCCATACCTGTGGCGGTCGAGGGCACATGTCATATGAATGTCCTTCAGCAAGAATGATAGACCGTATGCCTAGGAGGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89614.p1 GENE.S_Transcript_89614~~S_Transcript_89614.p1 ORF type:complete len:284 (+),score=40.08,zf-CCHC|PF00098.19|2.8e-06,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|1.6e-06,zf-CCHC|PF00098.19|3e-05,zf-CCHC|PF00098.19|0.009,zf-CCHC|PF00098.19|3.3e-05,zf-CCHC|PF00098.19|0.0025,zf-CCHC|PF00098.19|0.00044,zf-CCHC|PF00098.19|6e-05,zf-CCHC_3|PF13917.2|0.054,zf-CCHC_3|PF13917.2|0.4,zf-CCHC_3|PF13917.2|1.8,zf-CCHC_3|PF13917.2|0.92,zf-CCHC_3|PF13917.2|0.011,zf-CCHC_3|PF13917.2|0.16,zf-CCHC_3|PF13917.2|1.8e+02,zf-CCHC_3|PF13917.2|0.53,zf-CCHC_3|PF13917.2|2.5e-05,zf-CCHC_4|PF14392.2|1.4,zf-CCHC_4|PF14392.2|0.23,zf-CCHC_4|PF14392.2|8.6,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|12,zf-CCHC_4|PF14392.2|6.2,zf-CCHC_4|PF14392.2|0.1,zf-CCHC_4|PF14392.2|1.2,zf-CCHC_4|PF14392.2|2.6,zf-CCHC_2|PF13696.2|0.0037,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|48,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|4.7,zf-CCHC_2|PF13696.2|0.39,zf-CCHC_2|PF13696.2|0.031,zf-CCHC_2|PF13696.2|1.7e+03,zf-CCHC_2|PF13696.2|8.3 S_Transcript_89614:325-1176(+)
MSSRSQSSSHSRSRSRSRSRSRSPRDRRIRSQRYSFRDAPYRREGRRGFSQNNLCNNCKRPGHFARECPNVAVCNNCGLPGHIAAECTTKSLCWNCREPGHMASNCPNEGICHSCGKAGHRARECPNPELPPGDLRLCNNCFKQGHMAAECTNDKACKNCRKTGHLARDCQNEPVCNLCNIAGHVARQCPKADILGDRGSGGGGGVGGGHRYGGFGGGGGFGGYPVGGGYRDIVCRSCGHLGHMSRECMGAPPMIICHTCGGRGHMSYECPSARMIDRMPRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST