Transcript Information: S_Transcript_89637.p2


Annotated TAIR IDAT3G51690.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19176731-19178107 | Reverse length=331
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29085247251563
Replicate 20.6028084578556
Replicate 30.40311991439564
Condition 2: 8 Hour
Replicate 10.46612875010127
Replicate 20.1222505390149
Replicate 30.4659201662291
Condition 3: 24 Hour
Replicate 10.3581128441081
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89637.p2 GENE.S_Transcript_89637~~S_Transcript_89637.p2 ORF type:3prime_partial len:183 (+),score=25.72,PIF1|PF05970.10|1.6e-55 S_Transcript_89637:2030-2575(+)
ATGCGCTTGCAATCATCAAACTCTTATACTGAAGCCAATTATATCAAAACTTTTGCCGATTGGATTTTAAAGGTTGGTAATGGTGACATTGGTGAAGATGATGATGGTATAGCTGAATTTGAACTCCCTCCTGACTTGGTAATAAGTTCTAATGTTCAAGATCCAATTGCTACCATTGTCCAAGATACCTATCCTGACTTTGTGATGAGGTTGGATGATTCGCTTTACTTTCAACAACGGGCAATATTAGGGCCAACTAATGAGATTGTGGACGAAATCAACTCATATATGTTGTCTTTATTGCCTGGTAAAGAGGAAGTATATAGAAGTTGTGACGCGATTTGTTCAGATGATGCGATGAACTTTGCAGAGGATGAGGTATATTCCATAGAGTATCTTAACAGTTTGCAGTGTTCTGGGCTGCCTAATCATGAGCTCAAATTGAAAGTAGGTGCTCCGATCATGTTGCTTCGAAATATTGATTGCTCAGGTGGTTTATGCAATGGTACTCGATTACGTATAACTAAACTGGGTAGAAAAGTTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89637.p2 GENE.S_Transcript_89637~~S_Transcript_89637.p2 ORF type:3prime_partial len:183 (+),score=25.72,PIF1|PF05970.10|1.6e-55 S_Transcript_89637:2030-2575(+)
MRLQSSNSYTEANYIKTFADWILKVGNGDIGEDDDGIAEFELPPDLVISSNVQDPIATIVQDTYPDFVMRLDDSLYFQQRAILGPTNEIVDEINSYMLSLLPGKEEVYRSCDAICSDDAMNFAEDEVYSIEYLNSLQCSGLPNHELKLKVGAPIMLLRNIDCSGGLCNGTRLRITKLGRKVI

Click here to download the sequence:
Link to NCBI Protein BLAST