Transcript Information: S_Transcript_8981.p1


Annotated TAIR IDAT5G48910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)LPA66
Annotation TypeOrtholog
Chromosome Positionchr5:19832969-19834909 | Reverse length=646
E-Value4.6E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9081175682613
Replicate 27.6619729425679
Replicate 38.7969536130982
Condition 2: 8 Hour
Replicate 111.599584691328
Replicate 210.671090982966
Replicate 311.193049683787
Condition 3: 24 Hour
Replicate 18.1347055676271
Replicate 29.3405248546871
Replicate 38.231462190791


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8981.p1 GENE.S_Transcript_8981~~S_Transcript_8981.p1 ORF type:complete len:478 (+),score=109.08,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|7.9e-08,PPR|PF01535.16|0.0015,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|0.095,PPR|PF01535.16|0.12,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|9.9,DYW_deaminase|PF14432.2|2.6e+03,DYW_deaminase|PF14432.2|6.3e-41,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|3.7e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|4.5e-12,PPR_2|PF13041.2|8.2,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|9.4e+03,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|7.6e+03,PPR_1|PF12854.3|9.9e+03,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|14 S_Transcript_8981:724-2157(+)
ATGCTCATTTGTTGTTTTATAAGAGGATTGAACATGGTGATGATGGATGTATGGGAATTGGAGTTATGGGTGTTGATGGGCTTAGGAAAAGGAGACAAGATGATGTGGTTTTATTGGAATGTTATGGTTGATGGGTACTTGAAACTTGGAGACCTGAAAGCTGCACGTGAACTGTTTGATAAAATGCCTCAAAGAAGTGTTGTTTCTTGGAATGGAATGATAGCTGGTTATGCCCAGCATGGATGTTTTAAGGATGCTGTTGAGATCTTTAGAGAAATGCAGTTGGTTGATGAGGATGTTAAACCTAACTATGTAACATTGGTTAGTATCCTTCCCTCAGTCTCCCATTTGGGTGCACTTGAATTGGGGAAATGGATTCATTTGTATGCTGACAAAAATGGGATAGAGATTGATGATGTTCTTGGTTCTGCTTTGATTGATATGTATTCCAAGAGTGGGAGTGTTGAAAAGGCACTCCAGATCTTTGAGAGTCTCCCAAAGAAAAAAAGCACAATAACATGGAATGCTGTCATTAACGGGCTTGCTGTTCATGGGCGTGCAGATGATGCTATTCGTTATTTCTCGAGGATGCAAGATGCTGGGATCAAGCCCAGTGATGTTACTTATATAGGTCTTTTGACTGCTTGTAGCCATGGTGGAAAGGTGAGTGAAGGTAAAATGTTCTTTGAGCACATGATAGAGGTTGCTGGGTTTCAGCCCAGGGTTGAACACTATGGTTGCATGGTTGATCTCCTAGGTCGAAATGGACTCTTGAATGAAGCTGAAAATTTTATATTTAACATGCCCATGAAACCCGACGATGTCATATGGAAGGCCTTGTTGGGTGCATGTAAGATGCATGAGGAGATTGAGATGGGAAGACGAGTGGCCAGACATCTTATGGAAATGGTACCCTCTGATAGTGGATCATATGTTGCTCTGTCCAATATGTATGCTTCTCTGGGAGACTGGGAGGGAGTTGCTCAGGTTAGATTGCTGATGAAGAATAGAGACATTAGAAAGGACCCTGGATGTAGTTGGATTGAGTTGGATGGTGAAATCCATGAGTTCCTTGTTGAAGATGACTCACACAAGCATGCAAAGGAGATCCATCTGATGTTGAAAGAGATTTCTGACAAATTGTGCTCTGTAGGGTACCAGCCAGATACCACACAAGTATTGCTTAATGTGGATGAAGAAGAAAAACAAAGTGCCTTGCACAACCATAGTGAGAAGATTGCAGTTGCATTTGGGTTGATTAGTACGACTCCTCAAGCACCACTTCGGGTGGTTAAGAACCTTCGAATATGCGAAGATTGTCACTCTTCAATGAAACTGATCTCGAAATTGTACAAACGGAAAATAATTGTTAGAGATAGAAAACGGTTCCATCATTTTATAAATGGATCCTGTTCTTGCAATGACTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8981.p1 GENE.S_Transcript_8981~~S_Transcript_8981.p1 ORF type:complete len:478 (+),score=109.08,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|7.9e-08,PPR|PF01535.16|0.0015,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|0.095,PPR|PF01535.16|0.12,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|9.9,DYW_deaminase|PF14432.2|2.6e+03,DYW_deaminase|PF14432.2|6.3e-41,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|3.7e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|4.5e-12,PPR_2|PF13041.2|8.2,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|9.4e+03,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|28,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|7.6e+03,PPR_1|PF12854.3|9.9e+03,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|5.1e-05,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|14 S_Transcript_8981:724-2157(+)
MLICCFIRGLNMVMMDVWELELWVLMGLGKGDKMMWFYWNVMVDGYLKLGDLKAARELFDKMPQRSVVSWNGMIAGYAQHGCFKDAVEIFREMQLVDEDVKPNYVTLVSILPSVSHLGALELGKWIHLYADKNGIEIDDVLGSALIDMYSKSGSVEKALQIFESLPKKKSTITWNAVINGLAVHGRADDAIRYFSRMQDAGIKPSDVTYIGLLTACSHGGKVSEGKMFFEHMIEVAGFQPRVEHYGCMVDLLGRNGLLNEAENFIFNMPMKPDDVIWKALLGACKMHEEIEMGRRVARHLMEMVPSDSGSYVALSNMYASLGDWEGVAQVRLLMKNRDIRKDPGCSWIELDGEIHEFLVEDDSHKHAKEIHLMLKEISDKLCSVGYQPDTTQVLLNVDEEEKQSALHNHSEKIAVAFGLISTTPQAPLRVVKNLRICEDCHSSMKLISKLYKRKIIVRDRKRFHHFINGSCSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST