Transcript Information: S_Transcript_8982.p1


Annotated TAIR IDAT5G48910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)LPA66
Annotation TypeHomolog
Chromosome Positionchr5:19832969-19834909 | Reverse length=646
E-Value3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3692897228873
Replicate 24.3544979389832
Replicate 34.6915732142493
Condition 2: 8 Hour
Replicate 14.6766206835818
Replicate 23.532397153641
Replicate 36.544339176968
Condition 3: 24 Hour
Replicate 14.2156792701147
Replicate 25.0695367999724
Replicate 34.6461660746266


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8982.p1 GENE.S_Transcript_8982~~S_Transcript_8982.p1 ORF type:complete len:228 (+),score=38.98,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|3.6e-06,PPR_2|PF13041.2|1.1e+03 S_Transcript_8982:171-854(+)
ATGAACACGTACACTTACAATCCTAATCCTACCATCAATCCAGTCAAACCCCTAGTTTCCCCTTCTTCTTCTACTAACTTCCCAGAAATTTCCAAATGCCAAAACATCAAAAACTTGAAACAAATCCACGCCAAACTCATCAAAACAGGCCAAATTCATGACCCCCTTATATCAGCTGAGCTTCTCAAATGCTCTGCTCTATCAAACTATAGAGACCTTGACTATGCAAGGCTCTTGTTTTACCAGATCAACAACCCCAACCCCTTCTCTTACAACACCATTATTAGAGCCTTAGCTGAGAGTTATGACAAAAGTGAAAATTTTGATGATGACCCATTTGAGGCTTTAGCTATTTTCGTATCGATGTTGTGTGATGAGTTAGTTTCTCCTAACAAGTTCACTTACCCTTCTGTGCTTAAAGCTTGTGCAAAGTTGAAAACTTTGGATGTGGGCAAGCAAGTTCATGCCCAAGTGGTAAAATTTGCGTTTTTTGATGATGAGTTTGTGGTTAGTAATCTAGTTAGGATGTACCTTATGTGTGGTAATATGGGTGATGCTCATTTGTTGTTTTATAAGAGGATTGAACATGGTGATGATGGATGTATGGGAATTGGAGTTATGGGTGTTGATGGGCTTAGGAAAAGGAGACAAGATGATGTGGTTTTATTGGAATGTTATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8982.p1 GENE.S_Transcript_8982~~S_Transcript_8982.p1 ORF type:complete len:228 (+),score=38.98,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|3.6e-06,PPR_2|PF13041.2|1.1e+03 S_Transcript_8982:171-854(+)
MNTYTYNPNPTINPVKPLVSPSSSTNFPEISKCQNIKNLKQIHAKLIKTGQIHDPLISAELLKCSALSNYRDLDYARLLFYQINNPNPFSYNTIIRALAESYDKSENFDDDPFEALAIFVSMLCDELVSPNKFTYPSVLKACAKLKTLDVGKQVHAQVVKFAFFDDEFVVSNLVRMYLMCGNMGDAHLLFYKRIEHGDDGCMGIGVMGVDGLRKRRQDDVVLLECYG*

Click here to download the sequence:
Link to NCBI Protein BLAST