Transcript Information: S_Transcript_89837.p1


Annotated TAIR IDAT1G49040.1
Annotated Gene Namestomatal cytokinesis defective / SCD1 protein (SCD1)
Annotated Gene Symbol(s)SCD1
Annotation TypeOrtholog
Chromosome Positionchr1:18139419-18148826 | Reverse length=1187
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6270479004043
Replicate 210.112111880528
Replicate 39.713174337363
Condition 2: 8 Hour
Replicate 111.959989736192
Replicate 210.253763959875
Replicate 312.221085960189
Condition 3: 24 Hour
Replicate 19.484320248833
Replicate 29.6887794488885
Replicate 39.121972726517


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89837.p1 GENE.S_Transcript_89837~~S_Transcript_89837.p1 ORF type:complete len:1200 (+),score=231.09,DENN|PF02141.17|2.3e-47,WD40|PF00400.28|0.00043,WD40|PF00400.28|0.00082,WD40|PF00400.28|0.00011,WD40|PF00400.28|59,WD40|PF00400.28|0.0063,WD40|PF00400.28|0.089,WD40|PF00400.28|2.2e+03,WD40|PF00400.28|15,uDENN|PF03456.14|8.1e-09,dDENN|PF03455.15|1.3e-05 S_Transcript_89837:231-3830(+)
ATGGCCCCCATATTCGAGTACTTTATAGTGTGTGGGATCGGGCCAGAGATTCGAACATTGGATGAAAACAAGGGGTTTTATGGCATGAGTTACAGATACTTGCCCTCGCTTTTGGATCAGTTTCCCCCTCCTAATCACTCCCTCTATCCTCCACCTCCTCCTCAGCTTTCTACTTGTGTTTTGCCTGCTGGAGTGGAATTCTATGCATCAGGATTTAATTGCAATGATCACTTCACACATCCTCGGACCTATCCTATTGTCTTAACAGAGGGTGATGGATCCAAAATCTATGTTTGTTGCATTGCTTTTCGGGATCCAGTTGATGAGGATATTGCTGAAGCATATCGTATTCCCTCCAATTCATATGCGGACAAGTGCATCTGTCTTGTTTCACGTTTGCCCAGTTTTCATGTGCTACGTAGTGCTCTGGAGGAGATATTTGCTCTTTGTTTCTCTCCTGAAGGAAGTTGCAAGCCTTTATGGAATGTCATATCCTCTATGGTTTCCAATGTTCCCCTGCCTACGCCAGGAAAAGATCGAGTTTTATTTGCTATTGAGAATTGCTTATTATCAGTTGAGGCTCCACCGAAAAATGGGCTACCTCATGCTGATATATCCTTTCAGCCATTGGTGCAGTGCTTGGATATTGACAACTTGCTTAAGCTATTCACTGCTGTACTACTTGAAAGGAGAATTCTGCTTCGGTCAAACAAGTATTCACTTTTGACACTTGTATCTGAGGCCATTTGCCATCTGATCTATCCATTTAGGTGGCAGCATGTGTACATTCCGTTACTATTTTTCAGCGGAGTGGATTATATTGATGCTCCGACACCATACATGATGGGTCTTCATTCTGGTGTTGATACCTCAGGCCTTTCAATGGATGGTGTTGTTATTGTGGACCTTGAGTGCAATCGCATCACCACCTCAGAAGATATACCCCCTATCCCAGAGCCAGAGCTGAGTTCTTTACGTAGTGAGATCTTAAAATTACTATGTCCTAACGTTGTTGGCATAGACCAGGTGAAGGTTGGCATTCAAACATCCTCTGAGCAGGGCCTCAAATTTGCTACAAAACCTTGGTCAGAAGAGCATGACTTTCAACTAAGGCTGGTATTTCTGAAGTTTTTTGCATCTATTTTATCTGGATATCGGAACTTTATAGAAAATACTGCAACCAATGTGTTTAACACCCAAGCGTTCTTGAAGAAGCGTTCTCGGTTGACTACTCAACCCCCAGATCCCATGATAACACAATTTTTGGAGACTCAAGGTTTCTTAGACTTTCTTGAAAGAGGCATAGGTTTTGATGACAACAACCACAATCTTCTCGATAAGTTGCAAGATGCGCTTGGGAGAGGGCAGGACCCTATGTCAATATTACCAGAACCTCTTTTAGAGCCTGAAATTATTACAATATCAGATCATGGTGACAAAGAAGTTACTGCTGCCAGATATGTGTATGACAGGTTTCCTTCAAATATGAGAACAGAGGAGCACGAAGAGAAGAGGAAGCAGATTCTTGCTTCAGTTAGTGGAGCCCTTGATAACTCTACAAAACTTACACTAGATCGTTCTGAAAGTCTCAGTCCAAGGGAACGCGCTGCAGAGCGTGAGCGCATGGTTTTGGACATCAAAGTGAAGCTGCAGGGGTTGTGGTTACGTCTTCTGAAATTAGGGGCAACAGATGATCCCTTGTCCTCTTTTGAATATGGAACTATACTTGCTCTCATTGAATCTGATGCGGATGGTATTGGTGGTAGTGGTTTTGTTGAATGTATAAGAGAACATATAAACACTGGTTGGACTTGTCAATTGACTGAAGAACAGTTTATTGCTGTCAAAGAACTGTTGAAAACTGCGATTACTCTAGCAAATTCCCGGAATGACATGTCAACAATTAGGGATGCACTTGAAGTCTCCGCTGAAATATACAAGAAAGATGTCAACAATATTTCAGATTGTGTCCAACGCCATATTGTTTCCCTTCCCATTTGGGAGGAGTTACGATTCTGGGAAGGATATTTTGAGCATCTTATGGAGCAGACCTCCAACAAGTCATCCAATTATGCCACCCTAGTTATGACACAGCTAATTGTAGTTGCATCACATATGGCTGGACTGGGACTTCCTGATGTTGATGCTTGGCACATTATTGAGACCATAGCAGAGAAAAATAATATTGGGTATAAACAATTTATACAATTAAGAGGCTATTTATCACATATCCACCAACTACGCTTTGGATACTGGGGAATATCTGCTGCAAAAGCTCAATCCTTGGCATCTTATGGATTGCAATCTCCTCATCTGCAAGATGCTGTAAGTGACAGTCAACAACCTGCAGAGGCATCTAGTGTTGGAAGGAGCTGGGTCCAAAGCATGTTTAGCAGGGATACGTCATTAAGGGGGCATAGTTTCGCTCGTATGCATAGTGGACTATCAGCTGCGAATGAGAATGGAGCACCTGGTAAACAAGATCTGGCAAATGCAGGACAGAAGAGACTTCAGACAAATGTGCGTGTCCTTAGGGGCCACAGCGGTGCCATTACTGCTTTACATTGTGTCACAAAAAAGGAGGTGTGGGATCTTGTTAGTGACCGTGAGGATGCAGGTTTCTTCATTAGTGGAAGCACAGATTGCCTGGTTAAGATATGGGATCCAAGTCTTCGTGGTTCCGAGCTTCGGGCAACATTGCAAGGTCATACTGGGCCCGTACGTGCAATAAGTTCTGATCGAGGGAAAATTGTCTCGGGATCCGATGATCAGTCAATCTTGGTATGGGATAAGCAAATGTACCAGCTTCTAGAAGAGCTGAAAGGACATAATGCTTCAGTCAGCTGTGTGCGAATGCTTTCAGGAGAACGTGTTCTTACTTCTGCTCATGATGGAACCCTAAAAATGTGGGATGTGAGGACTGATACTTGTGTGGCAACAGTTGGTCGTTGCTCAGCTGCAATTCTTTGTATGGATTATGATGATTCCACCGGAATTTTGGCTGCTGCTGGTAGGGATTCAGTTGCATACTTATGGGACATCCGTGCTGGTAGACAAATACACAAGCTCTTGGGACATACAAAATGGATCAGGTCCATCAGAATGGTCGGAGATACACTGATAACTGGAAGTGATGATTGGACAGCAAGGGTGTGGTCGGCTTCCCGTGGTACATGTGATGCTGTTTTAGCATGCCATTCAGGTCCTGTTCAATGTGTCGAGTATTCAAAATTGGAGAAGGGAATAATCACTGGCTCAACAGATGGTCTGCTACGATTCTGGGAAAATGCCGAGGGAGGTATAAGATGTGTCAAGAACGTTACTTTACATTCTTCACCTATATTATCCATCAATGCCAGTGAGCATTGGCTGGGGATCGGAGCAGCAGATAATTCCATGTCCCTTTTTCATCGCCCACAAGAAAGACTTGGTGGGTTCTCTAGCTCTGGCTCTAAAGCTACCGGTTGGCAGCTTTACAGGACACCCCAGAAATCAGCTGCAGTGGTGAGATGTGTGGCTGCCGATCTTGAGAGAAAGAGGATATGCAGTGGTGGACGTAATGGACTGCTCCGCTTATGGGATGCTACTATCAACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89837.p1 GENE.S_Transcript_89837~~S_Transcript_89837.p1 ORF type:complete len:1200 (+),score=231.09,DENN|PF02141.17|2.3e-47,WD40|PF00400.28|0.00043,WD40|PF00400.28|0.00082,WD40|PF00400.28|0.00011,WD40|PF00400.28|59,WD40|PF00400.28|0.0063,WD40|PF00400.28|0.089,WD40|PF00400.28|2.2e+03,WD40|PF00400.28|15,uDENN|PF03456.14|8.1e-09,dDENN|PF03455.15|1.3e-05 S_Transcript_89837:231-3830(+)
MAPIFEYFIVCGIGPEIRTLDENKGFYGMSYRYLPSLLDQFPPPNHSLYPPPPPQLSTCVLPAGVEFYASGFNCNDHFTHPRTYPIVLTEGDGSKIYVCCIAFRDPVDEDIAEAYRIPSNSYADKCICLVSRLPSFHVLRSALEEIFALCFSPEGSCKPLWNVISSMVSNVPLPTPGKDRVLFAIENCLLSVEAPPKNGLPHADISFQPLVQCLDIDNLLKLFTAVLLERRILLRSNKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSGLSMDGVVIVDLECNRITTSEDIPPIPEPELSSLRSEILKLLCPNVVGIDQVKVGIQTSSEQGLKFATKPWSEEHDFQLRLVFLKFFASILSGYRNFIENTATNVFNTQAFLKKRSRLTTQPPDPMITQFLETQGFLDFLERGIGFDDNNHNLLDKLQDALGRGQDPMSILPEPLLEPEIITISDHGDKEVTAARYVYDRFPSNMRTEEHEEKRKQILASVSGALDNSTKLTLDRSESLSPRERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDADGIGGSGFVECIREHINTGWTCQLTEEQFIAVKELLKTAITLANSRNDMSTIRDALEVSAEIYKKDVNNISDCVQRHIVSLPIWEELRFWEGYFEHLMEQTSNKSSNYATLVMTQLIVVASHMAGLGLPDVDAWHIIETIAEKNNIGYKQFIQLRGYLSHIHQLRFGYWGISAAKAQSLASYGLQSPHLQDAVSDSQQPAEASSVGRSWVQSMFSRDTSLRGHSFARMHSGLSAANENGAPGKQDLANAGQKRLQTNVRVLRGHSGAITALHCVTKKEVWDLVSDREDAGFFISGSTDCLVKIWDPSLRGSELRATLQGHTGPVRAISSDRGKIVSGSDDQSILVWDKQMYQLLEELKGHNASVSCVRMLSGERVLTSAHDGTLKMWDVRTDTCVATVGRCSAAILCMDYDDSTGILAAAGRDSVAYLWDIRAGRQIHKLLGHTKWIRSIRMVGDTLITGSDDWTARVWSASRGTCDAVLACHSGPVQCVEYSKLEKGIITGSTDGLLRFWENAEGGIRCVKNVTLHSSPILSINASEHWLGIGAADNSMSLFHRPQERLGGFSSSGSKATGWQLYRTPQKSAAVVRCVAADLERKRICSGGRNGLLRLWDATINI*

Click here to download the sequence:
Link to NCBI Protein BLAST