Transcript Information: S_Transcript_89930.p1


Annotated TAIR IDAT2G38450.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16102016-16102683 | Forward length=138
E-Value2.6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8236064738765
Replicate 26.6188368672544
Replicate 35.5328208250802
Condition 2: 8 Hour
Replicate 115.061056911475
Replicate 216.499238371798
Replicate 315.986885703736
Condition 3: 24 Hour
Replicate 14.9150987853837
Replicate 24.3911134929173
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89930.p1 GENE.S_Transcript_89930~~S_Transcript_89930.p1 ORF type:complete len:160 (+),score=35.32 S_Transcript_89930:279-758(+)
ATGGGAAAGTCAGTTCCTTCAGCTGCCAGGCTTCAGAACTTTGCAAGAATTATATCATCAGAAATATTCAACACCCCAAAACAAGCAAAACCCACAACATCAAATAAAGTTTCTCCTTCTTCAAAAATACAACAGCAATCAGTCGGTCGAGTTGACACGGCCCAACTCGGTTTGAAGATGGACAATTCACTGAGTCGGAACAACAACCGGGTGCCATTGTCCCATGTTGTGTCGGATTGTGTGAAACGTTGGTTCCAAGATACTCTTAAGGAGGCTAAAGCTGGTGACTCTGCCATGCAACTTTTGGTGGGTCAGATGTATAATAGCGGTTATGGTGTTCGCAAGGATGCTGAAAAGGGTCGCACTTGGATTGCTAGAGCTTCAAAAGGTAGATCTTCTGCTTGGAGAGTCAGCAATAAACAGCCAGGCTACAATGCAAGTGACTCAGAGTCAGAGGATATAAAGGATGTCAGGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89930.p1 GENE.S_Transcript_89930~~S_Transcript_89930.p1 ORF type:complete len:160 (+),score=35.32 S_Transcript_89930:279-758(+)
MGKSVPSAARLQNFARIISSEIFNTPKQAKPTTSNKVSPSSKIQQQSVGRVDTAQLGLKMDNSLSRNNNRVPLSHVVSDCVKRWFQDTLKEAKAGDSAMQLLVGQMYNSGYGVRKDAEKGRTWIARASKGRSSAWRVSNKQPGYNASDSESEDIKDVRS*

Click here to download the sequence:
Link to NCBI Protein BLAST