Transcript Information: S_Transcript_89951.p3


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47019436811273
Replicate 20.70164348416125
Replicate 30.19550603622191
Condition 2: 8 Hour
Replicate 11.1303210415442
Replicate 21.2648394990658
Replicate 31.5064203254404
Condition 3: 24 Hour
Replicate 10.30876160410734
Replicate 20.24025241953725
Replicate 31.1586098136626


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_89951.p3 GENE.S_Transcript_89951~~S_Transcript_89951.p3 ORF type:complete len:283 (+),score=58.91,zf-RVT|PF13966.2|5.5e-09 S_Transcript_89951:4688-5536(+)
ATGATGTTTTGGAGAGCGGCAGTGGGTGGAATCCCCTTGAAAAGCACTATTAAGAAGAGAACTCCTGATATTGATGATAAGTGCGTAATGTGTCACAATGAGATAGAAGACGTGGTGCATCTATTTTTCACCTGTCAGGTGAGCAGGGCAATCTGGTTCATGGTAGTAGGTTTGAGGACTGAGGTGTTTGGAGATTGGGGAATGCAAGATTGGTTGAAAGCATGTTTGAACCCTGAAAAATTTAATCTGAGGGATAAAGGCAGGGAGAAAGAGTTAGCTCAACAAGCTGTTGTTCTTATTGACTGTATTTGGAGGGAGAGGAACAATTGTTTGCATGAAGGAAGACCTCCTGATATACAGACCACGGTTACACAATTTCAGAAGCTATGGAGGGAGATTAAGGTATCTGAAGCTGATCTCATGAAAGCTCCACTGGATATCAGAAGCCTTAACTTGGACGCAGACCATATCTTTTGCACTGATGCTGCTATCATAAAGGAATTTTCTATGAGTGCTTGGATTAAGCTCAATAGCAAAGGGGAAGTTATGGAAGCTCAGACTTGTAAGGTCATTACTATTGAGCCTTCAATGGCTGAAATGATGGGTATTGTTCTGGCAGTCAGACATATTGTAAAGGAGAAGTTAAGAGGCTGCATCATATTCTCAGATGCAAAAAATATAGTTGATATGGAGAATGGAGGTCCACCTTTTGAATGGAGACTCAATGGGAAGCTCAAGAAGTCATGGAAGCTAGAAACATTTCAGACATCCAGATCAGATATATCAGTAGGAATCTCAACACTGCTGCTCACAATATTGCAGCATGGTCAGCTTGGTTTAATGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_89951.p3 GENE.S_Transcript_89951~~S_Transcript_89951.p3 ORF type:complete len:283 (+),score=58.91,zf-RVT|PF13966.2|5.5e-09 S_Transcript_89951:4688-5536(+)
MMFWRAAVGGIPLKSTIKKRTPDIDDKCVMCHNEIEDVVHLFFTCQVSRAIWFMVVGLRTEVFGDWGMQDWLKACLNPEKFNLRDKGREKELAQQAVVLIDCIWRERNNCLHEGRPPDIQTTVTQFQKLWREIKVSEADLMKAPLDIRSLNLDADHIFCTDAAIIKEFSMSAWIKLNSKGEVMEAQTCKVITIEPSMAEMMGIVLAVRHIVKEKLRGCIIFSDAKNIVDMENGGPPFEWRLNGKLKKSWKLETFQTSRSDISVGISTLLLTILQHGQLGLMY*

Click here to download the sequence:
Link to NCBI Protein BLAST