Transcript Information: S_Transcript_90045.p1


Annotated TAIR IDAT3G54860.2
Annotated Gene NameSec1/munc18-like (SM) proteins superfamily
Annotated Gene Symbol(s)ATVPS33, VPS33
Annotation TypeOrtholog
Chromosome Positionchr3:20324286-20329841 | Reverse length=608
E-Value9.4e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.891389156882
Replicate 232.872075716566
Replicate 331.563071820927
Condition 2: 8 Hour
Replicate 133.526662293882
Replicate 233.407626324424
Replicate 331.043885438127
Condition 3: 24 Hour
Replicate 135.039779558738
Replicate 228.367790999925
Replicate 333.643498828972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90045.p1 GENE.S_Transcript_90045~~S_Transcript_90045.p1 ORF type:complete len:596 (+),score=118.42,Sec1|PF00995.19|9.7e-93 S_Transcript_90045:236-2023(+)
ATGGCTCAAATCCCAAATTTAGACAATGCTCCCATTCATCTGGCTTCTTTCAGAGATCAATCACAGAAGGAGCTGATAACCATTTTAAAAAATATCCGAGGTAAAAAATGTCTTGTCATCGATCCAAGGCTTGGTGGCTCTCTCTCTCTAATTGTCCAGACTTCTGTTCTCAAGGAACATGGAGTGGAATTGCGCCATTTATCTGCAGAACCTCTAGAAACTGAATGTAGCAAAGTTGTGTACCTTGTTTGTGCTCAACTTGATTTGATGAGACATATTTCGTTGCATATTCATGACAGTACAACAAAAGGTCTACAAAGGGAGTGTTCTGTTTACTTTGTACCAGGACGTTCAGTTGCATGTGAGCAGTTATTGAAAGAGGAGAAAGTACATGACTTGTTGACCATAGGAGAATTTCCATTATACATGGTCCCGTTAGATGAGGATGTAATATCATTTGAACTGGACTTTGCATACAAGGAGTGTCTAGTTGATGCTGATACAAGCTCTCTTTGGCATATTGCAAAAGCCATTCATAAGCTTGAGTTGTCATTTGGTATGATCCCAAACGTGAGGGCAAAAGGCAAGGCTTCACTTCGTGTTGCAGAGATCCTAGATAGGATGCAGATAGAAGAGCCAGTCAGCATATCAGATATGATGCCGGAGATAAGTACAGTGATCTTGCTAGACAGAGAGGTAGACATGGTCACTCCGATGTGTTCACAGTTGACATATGAAGGCTTGTTGGATGAGATATTACATGTGAATAATGGGGCAGTGGAGCTTGATGGATCTATCATGGGTGTGCAGCAGGAGGGAAGAAAGGTTAAAGTTCCACTAAATTCAAGTGACAAACTCTTTAGGGAAATTCGAGATCTTAACTTTGAAGTTGTTGTCCAGGTCCTACGTCAAAAGGCAACATCAATGAAACAAGACTATACTGATATTACAAAAATGAATCAGTCTGTTTCTGAACTAAAGGACTTTGTCAAGAAACTGAATTCTTTACCAGAGATGACTAGGCACATAAATCTTGCTCAACATCTGTCCACGTTTACATCCAAACCAGCATTTCTTGGCCGTCTTGATATGGAGCACACAATTGTTGAGTCCGAAAGCTATGATATATGCTTCGAGTATATTGAAGAAATGATCCACAAGCAAGAACCTCTAGTTAGTGTCCTTAGGCTTCTCGTCTTACTTTCTGTTACAAATTCTGGGTTGCCTAAGAAACATTATGACTATTTGAGGAGGGAGCTACTTCACAGCTATGGATTTGAGCACGTGGCAACACTGAATAGTTTGGAGAAGGCTGGGTTATTCAAAAAGCAGGAATTGAGAAGCAATTGGTTGACGATTAAACGAGCTCTTCGCCTTGTAGTTGAAGATACTGATACAGCCAATCCGAATGACATTGCTTATGTATTTTCTGGATATGCACCTCTTAGCATCCGTCTCATTCAACAAGCCATCAGATCAGGATGGCGTCCAATTGAAGAAATCCTGAAGCTACTACCTGGACCGCACTATGAAACAAAAAGAGGAGCACTTCCACGTGATTCATCATCTGAGTCACTCTCTGCGGGGGCTGCAAATGTTGACAAATCGGCTGTTGGAAGGCGCTCTTTGGTACTGGTTGTCTTCATTGGTGGAGTGACATTTGCTGAAATATCTGCCCTTCGGTTTCTGAGTTCTCAGGAGCTGATGGCATACGACATAATCGTTGCGACAACAAAAGTAGTCAATGGCCAGACTTTGCTAGATACTTTTGTGGAAAAGCTGCCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90045.p1 GENE.S_Transcript_90045~~S_Transcript_90045.p1 ORF type:complete len:596 (+),score=118.42,Sec1|PF00995.19|9.7e-93 S_Transcript_90045:236-2023(+)
MAQIPNLDNAPIHLASFRDQSQKELITILKNIRGKKCLVIDPRLGGSLSLIVQTSVLKEHGVELRHLSAEPLETECSKVVYLVCAQLDLMRHISLHIHDSTTKGLQRECSVYFVPGRSVACEQLLKEEKVHDLLTIGEFPLYMVPLDEDVISFELDFAYKECLVDADTSSLWHIAKAIHKLELSFGMIPNVRAKGKASLRVAEILDRMQIEEPVSISDMMPEISTVILLDREVDMVTPMCSQLTYEGLLDEILHVNNGAVELDGSIMGVQQEGRKVKVPLNSSDKLFREIRDLNFEVVVQVLRQKATSMKQDYTDITKMNQSVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPAFLGRLDMEHTIVESESYDICFEYIEEMIHKQEPLVSVLRLLVLLSVTNSGLPKKHYDYLRRELLHSYGFEHVATLNSLEKAGLFKKQELRSNWLTIKRALRLVVEDTDTANPNDIAYVFSGYAPLSIRLIQQAIRSGWRPIEEILKLLPGPHYETKRGALPRDSSSESLSAGAANVDKSAVGRRSLVLVVFIGGVTFAEISALRFLSSQELMAYDIIVATTKVVNGQTLLDTFVEKLP*

Click here to download the sequence:
Link to NCBI Protein BLAST