Transcript Information: S_Transcript_90059.p1


Annotated TAIR IDAT5G52380.1
Annotated Gene NameVASCULAR-RELATED NAC-DOMAIN 6
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21261521-21263061 | Reverse length=268
E-Value1.8E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2527001509665
Replicate 26.046838619467
Replicate 36.010965834655
Condition 2: 8 Hour
Replicate 13.0013512298187
Replicate 25.1372393172706
Replicate 33.5526412674969
Condition 3: 24 Hour
Replicate 19.3852092033664
Replicate 26.043683087026
Replicate 36.1653886323617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90059.p1 GENE.S_Transcript_90059~~S_Transcript_90059.p1 ORF type:5prime_partial len:270 (-),score=50.56,zf-CCHC|PF00098.19|0.045,zf-CCHC|PF00098.19|1.1e+02,zf-CCHC|PF00098.19|1.7e-05,zf-CCHC|PF00098.19|6e-05,zf-CCHC|PF00098.19|0.23,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|0.24,zf-CCHC_4|PF14392.2|0.032,zf-CCHC_4|PF14392.2|0.43,zf-CCHC_4|PF14392.2|1.1 S_Transcript_90059:209-1018(-)
AGCGCCAAACCTTCTGCAAGAATTTCTCAGTTTTTGTCCAAATTTCTTGTATGCTTATTGTTAATCACTAATAACAAGAACATGGTGAGCAAAAGGCAGAGAGAAGCTACAAAAAGGTTCAAAGCAGAGCACCCAGAAATGTTCCCAAAGGCTGAACCAACGCCCCCAAAAGACCCAACTAAGAAGAAGAAGAAGAAAAAACAACCCAACTTCAAGCGCAAGAAATCTGATGATGGTAAACCCCAGAAATCAAAGTTCAGAAAACAGCTCTTAAGAGTACCTGGTTTGAAGCCTGGTGAAAGCTGCTTTATTTGCAAGGACTTGCATCATATTGCTAAGAACTGCCCCAAAAAATCTGAGTGGGAAAAGAACAAGATATGTTTATTTTGTCGACATCATGGGCATAGTTTGAAGAACTGTCCTAACAAGACTGAAGAAGTTACTGAAGAGAAGCTGTGCTATAATTGTGGTGAAACTGGGCACTCGCTATCTAAATGCCCCCAACCTTTGCAAGATGGTGGAACAAAATTTGCACTTTGCTTTATATGCAAAGAACGTGGACACTTGAGTAAGAACTGTCCCAAAAATACACATGGGATATACCCAAAGGGCGGGTGCTGTAAAATATGTGGTGGTGTAACCCATTTAGCCAAAGATTGCCCAGACAAAGGAAAAGGATTCAGTTTTGGCAATGTTCGTGGTAGAGGTAATTTGTTTAATGTCTACTCTTCTAATGCAATACGTGGTGATGCTCAAACTTTGTCTTGTTCTACATCATTGCAAAGACAGCCTAATTACCAAGGAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90059.p1 GENE.S_Transcript_90059~~S_Transcript_90059.p1 ORF type:5prime_partial len:270 (-),score=50.56,zf-CCHC|PF00098.19|0.045,zf-CCHC|PF00098.19|1.1e+02,zf-CCHC|PF00098.19|1.7e-05,zf-CCHC|PF00098.19|6e-05,zf-CCHC|PF00098.19|0.23,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|0.24,zf-CCHC_4|PF14392.2|0.032,zf-CCHC_4|PF14392.2|0.43,zf-CCHC_4|PF14392.2|1.1 S_Transcript_90059:209-1018(-)
SAKPSARISQFLSKFLVCLLLITNNKNMVSKRQREATKRFKAEHPEMFPKAEPTPPKDPTKKKKKKKQPNFKRKKSDDGKPQKSKFRKQLLRVPGLKPGESCFICKDLHHIAKNCPKKSEWEKNKICLFCRHHGHSLKNCPNKTEEVTEEKLCYNCGETGHSLSKCPQPLQDGGTKFALCFICKERGHLSKNCPKNTHGIYPKGGCCKICGGVTHLAKDCPDKGKGFSFGNVRGRGNLFNVYSSNAIRGDAQTLSCSTSLQRQPNYQGI*

Click here to download the sequence:
Link to NCBI Protein BLAST