Transcript Information: S_Transcript_90080.p1


Annotated TAIR IDAT4G31590.1
Annotated Gene NameCellulose-synthase-like C5
Annotated Gene Symbol(s)ATCSLC05, CSLC05, ATCSLC5, CSLC5
Annotation TypeOrtholog
Chromosome Positionchr4:15309889-15312336 | Reverse length=692
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.071842354303
Replicate 216.523487186441
Replicate 311.549730585878
Condition 2: 8 Hour
Replicate 18.7309372625067
Replicate 27.627491904272
Replicate 39.9737489506903
Condition 3: 24 Hour
Replicate 19.8161744643897
Replicate 212.091676932317
Replicate 312.053330778479


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90080.p1 GENE.S_Transcript_90080~~S_Transcript_90080.p1 ORF type:complete len:701 (+),score=99.81,Glyco_tranf_2_3|PF13641.2|4.9e-32,Glyco_trans_2_3|PF13632.2|1e+03,Glyco_trans_2_3|PF13632.2|7.4e+02,Glyco_trans_2_3|PF13632.2|1.5e-21,Glyco_transf_21|PF13506.2|7.4e-12,Glycos_transf_2|PF00535.22|1.1e-11 S_Transcript_90080:778-2880(+)
ATGGTGCCTGGAATAGATACAAGTAAATTCTGGGGAAAGGAATCAAAGAAGGGAACACCAGTAGTAGTGAAAATGGAGAACCCAAATTACTCACTCCTGGAAATAGAATCACCAGATTCTGCATTCAGGGCAGTTGATATTAAAGATAGAGGCAAAAATGCAAAGCAATTCACTTGGGTTTTACTCCTTAGGGCTCATAGAGCTGCTGGTTGTCTTGCTTGGCTTGGCCATGCTCTTTGGTCTTTACTTGGTACTATCAAAAAGAGGTTGTTTTTAGGTGAAGGTGTGAAAATTGAGAATGACAAGACCACTAAAGGGAAGTTACTATACAGGATCATTATGGGGTTCTTAATCACTGCTCTTGCTTTCTTGGCTTTTGAAGTCATTGCTCATTTCAATGGCTGGCATTACTTCCAATACCAATACCAAAACTTACATATTACTATCCCACATACTACTGTGGAGATTCAAGGTTGGGTTTATGGGATTTATGTCGGTTGGCTCGAGTTTCGTGCTGCTTATATTGCTCCTTTGATTCACTCTCTATCAAGCTTCTGTGTTGTTCTTTTCATCATTCAATCTCTTGATAGATTGGTCCTTTGTTTGGGTTGCTTTTGGATTAAGATCAAGAAGATTAAGCCTAGGTTTGATGGTGATCCTTACAAATCTCTTGATGCTGAGAATCCTGGCTCTAATTTTCCTATGGTTCTTGTTCAGATTCCCATGTGCAATGAAAGAGAGGTATATGAACAATCAATTTCAGCAGTTTGTCAACTAGATTGGCCAAGAGACAAGTTACTGATCCAAGTACTAGATGATTCTGATGATGAAGGTATTCAATGGCTAATTAAGAGTGAAGTCTCAAAATGGAGCCAAAAGGGTATAAACATTATCTACCGACATCGTTTGGTTAGAACTGGTTACAAAGCTGGCAACCTTAAATCTGCTATGAACTGTGATTATGTCAAAGACTATGAATTTGTTGCTATTTTTGATGCTGATTTCCAACCCAACCCTGATTTCCTACAACTAACCGTCCCCCATTTTAAGGATAATCCTGAACTTGGGTTGGTCCAAGCAAGGTGGTCTTTTGTGAACAAGGATGAGAACTTGTTAACTCGTCTTCAGAACATTAACCTTTGCTTCCACTTTGAGGTGGAGCAACAGGTTAACGGCGTGTTCTTGAATTTCTTCGGATTCAATGGCACTGCAGGGGTTTGGAGGATCAAAGCACTCGAGGAATCCGGTGGATGGCTAGAGAGGACCACGGTCGAGGATATGGACATTGCCGTCCGCGCTCATATCAATGGGTGGAAGTTCATCTACCTGAATGATGTAAAGGTGCTCTGTGAAGTTCCTGAATCTTATGAAGCATACAGAAAACAGCAACACAGGTGGCATTCTGGTCCAATGCAGCTCTTTCGTCTATGCTTACCGGCCATAATAACCTCTAAGTTGTCATTTGTGAATAAAGCAAACCTAATCCTGCTGTTCTTTCTCCTAAGGAAGTTAATCCTGCCATTCTATTCCTTCACATTGTTCTGCATCATCCTTCCCTTAACCATGTTTGTCCCTGAAGCCGAGCTACCAATGTGGGTTATCTGTTACATTCCCATTGTCGTGTCCTTGTTAAACATACTCCCCGCACCAGGGTCATTCCCCTTCCTCGTCCCTTACCTTCTTTTCGAGAACACTATGTCTGTGACCAAGTTCAATGCCATGATTTCGGGGTTGTTCCAATTGGGTAGTTCATATGAGTGGATCGTCACCAAAAAGGCAGGCCGTTCCTCAGAAACAGACCTCTTAGCTCTCGAGGAACGAGAAACTAAGGCTATCAATCAAACACAGCTCTACAGAGGTGCTTCAGACAGTGGTCTTTCCGAGCTTACGAAATTGAAGGAGCAACAACAAGTAACCCCAAAGCCGCCTAAGAAGAAGATGAACAAAATATACAAGAAAGAGCTCGCTTTAGCTTTCTTGTTGCTCACTGCCGCCCTCAGGAGCTTGTTATCAGCTCAAGGGGTGCATTTCTACTTCCTGTTATTCCAAGGAATCACCTTCCTCCTTGTTGGCTTGGATTTGATCGGCGAGCAAATGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90080.p1 GENE.S_Transcript_90080~~S_Transcript_90080.p1 ORF type:complete len:701 (+),score=99.81,Glyco_tranf_2_3|PF13641.2|4.9e-32,Glyco_trans_2_3|PF13632.2|1e+03,Glyco_trans_2_3|PF13632.2|7.4e+02,Glyco_trans_2_3|PF13632.2|1.5e-21,Glyco_transf_21|PF13506.2|7.4e-12,Glycos_transf_2|PF00535.22|1.1e-11 S_Transcript_90080:778-2880(+)
MVPGIDTSKFWGKESKKGTPVVVKMENPNYSLLEIESPDSAFRAVDIKDRGKNAKQFTWVLLLRAHRAAGCLAWLGHALWSLLGTIKKRLFLGEGVKIENDKTTKGKLLYRIIMGFLITALAFLAFEVIAHFNGWHYFQYQYQNLHITIPHTTVEIQGWVYGIYVGWLEFRAAYIAPLIHSLSSFCVVLFIIQSLDRLVLCLGCFWIKIKKIKPRFDGDPYKSLDAENPGSNFPMVLVQIPMCNEREVYEQSISAVCQLDWPRDKLLIQVLDDSDDEGIQWLIKSEVSKWSQKGINIIYRHRLVRTGYKAGNLKSAMNCDYVKDYEFVAIFDADFQPNPDFLQLTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHINGWKFIYLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIITSKLSFVNKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPMWVICYIPIVVSLLNILPAPGSFPFLVPYLLFENTMSVTKFNAMISGLFQLGSSYEWIVTKKAGRSSETDLLALEERETKAINQTQLYRGASDSGLSELTKLKEQQQVTPKPPKKKMNKIYKKELALAFLLLTAALRSLLSAQGVHFYFLLFQGITFLLVGLDLIGEQMS*

Click here to download the sequence:
Link to NCBI Protein BLAST