Transcript Information: S_Transcript_90099.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeOrtholog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value1E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.535887791991
Replicate 220.675192729998
Replicate 317.166823524358
Condition 2: 8 Hour
Replicate 17.3320000251778
Replicate 26.2847541252062
Replicate 39.9652704736076
Condition 3: 24 Hour
Replicate 17.7395918446759
Replicate 215.156720949381
Replicate 310.94541549656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90099.p1 GENE.S_Transcript_90099~~S_Transcript_90099.p1 ORF type:complete len:477 (+),score=94.90,Transferase|PF02458.11|8.3e-101 S_Transcript_90099:473-1903(+)
ATGGCATTGAGAGTGAAATCTAGGCACATTGTGAAACCCTCTAAGCCAACATGGAATGGCATTCTTCCTTTATCAGAATTAGACCAAATTGGAGCCATCACACACACAACCACCATATATTTTTACCAAAAACCAACACAAGATCTTAGCAACAAGCCCCCTATTGAGACCTTGATTGAGTCATTGAGCCGAGTTTTGGTTCCTTTTTTCCCTTTAGCTGGTCGATTGCATTGGATTGATCAAGGGGGGCGGCTCGAGCTCGAGTGCAATGCCATGGGTGTGGAGGTTATAGAAGCTGAATATAGCAAGCCAATGAGCTATTTTCGTGATTTCAAGGACTTTGAAGGTCTTATTCCTCATCCTGATTACTCCACCAAGCCAATGGAGGATCTTCCACTGCTCTTGGCCCAACTCACTCGCTTCGAGTGTGGTGGCCTTTGCCTTGGCTGCTCTTTCTCCCATGCAATCGTCGATGGGAGGAGTGGCTCCCATTTTGCTACCGAGTGGGCTAGGCTCACTCGTGGGGAGCCATTGGAGGCTCCTCCTTATCTAGATCGAGGCATCCTACAAACCAGGCACCAAGAATGCTCCATAAGGGGAGTTCCATATGCTGATCATGTCCAGCAATTTAGTCGACTTCCTAAATTGATAGGTGAAGAACCGAGCTTCGAGTCCGAGGGTCGGAAGAAGAAGGAGAAGGAGATAGTTGCAACCATGTTGCCATTGTCAAGAGGCCAAGTCCAAAAGCTTAAGAAGGTTGCAAATGTGATGGGAATTGTACGTCCTCGTTATGGAAGTTCAGAAGTAATTGCAGCTCATGTATGGAGATGTGCATGTAAAGCTCGTGGCCACAAGAGGGAGCAACTTACTGCTCTTTGCTTCACTGTTGATGCTCGTGACCGTATGGATCCACCTTTACCATCCAGGTATTTTGGCAATGCGATTATTGATGTAGTGACAACTAGCCAAGTGGAGGAGCTCATATTCAGTCCTTTAAGCCATGTATGCTCAAAGATAAGAGAGATGGTATTAAAGGTAACAAATGAGTATGTTTGTTCAGCAATTGACTTCTTTAAAACAAAGCAAAATTTGTCCAAGTACCAAGATAGATGTGCTCTAGGAAGCAAAGAAGGTGTTGTCTATGGGAATCCTAACATTGGAGTTGCTAGTTGGTTAAACCTTCCTCTTGTTGGGCTGGACTTTGGGTGGGGAAAGGAGGTTTTGTTTAGGCCTGGATGCTGTGAATTTGATGGTGATATCATGATTTTACCAGGCCTTAAAAAAGATGGATCAGTTGTTGTTGCAGTGGGCCTACAAGCTTCACATATGGAGAAATTCAAAAAATACTTTTATGAAGATATTGATGCACTTGATTTTCAACTAGACCATGTCTTGGAAGAAGTACCATTATCTATCCCATCTAGAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90099.p1 GENE.S_Transcript_90099~~S_Transcript_90099.p1 ORF type:complete len:477 (+),score=94.90,Transferase|PF02458.11|8.3e-101 S_Transcript_90099:473-1903(+)
MALRVKSRHIVKPSKPTWNGILPLSELDQIGAITHTTTIYFYQKPTQDLSNKPPIETLIESLSRVLVPFFPLAGRLHWIDQGGRLELECNAMGVEVIEAEYSKPMSYFRDFKDFEGLIPHPDYSTKPMEDLPLLLAQLTRFECGGLCLGCSFSHAIVDGRSGSHFATEWARLTRGEPLEAPPYLDRGILQTRHQECSIRGVPYADHVQQFSRLPKLIGEEPSFESEGRKKKEKEIVATMLPLSRGQVQKLKKVANVMGIVRPRYGSSEVIAAHVWRCACKARGHKREQLTALCFTVDARDRMDPPLPSRYFGNAIIDVVTTSQVEELIFSPLSHVCSKIREMVLKVTNEYVCSAIDFFKTKQNLSKYQDRCALGSKEGVVYGNPNIGVASWLNLPLVGLDFGWGKEVLFRPGCCEFDGDIMILPGLKKDGSVVVAVGLQASHMEKFKKYFYEDIDALDFQLDHVLEEVPLSIPSRI*

Click here to download the sequence:
Link to NCBI Protein BLAST