Transcript Information: S_Transcript_9022.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18874468961121
Replicate 20.15647368480507
Replicate 30
Condition 2: 8 Hour
Replicate 10.15124390295839
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.77464125853171
Replicate 21.1251537662016
Replicate 30.89439873777007


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9022.p1 GENE.S_Transcript_9022~~S_Transcript_9022.p1 ORF type:3prime_partial len:141 (+),score=29.08,RVT_1|PF00078.23|9e-24 S_Transcript_9022:633-1052(+)
ATGGCAAACAAAATCCAAGAAGTTATGGAGATTCTGGTGGGGAAGGAACAGGCTGCATTTGTTAAGAGTATAATTCTCTTTGACAATGTTCTTCTTGCTCATGAATTGTCACAACATTATGCTCGGGTTCATATCTCACCCAGAATCATCATGAAACTCAACATTCAGAAGGCATATGATACTGTTCGATGGGAGTTTATTGCTATGATCCTTGAAGCTTATGGCTTTCCCAAGGAATTTCAAGAGAGGGTACTCACATGTATCACTACTTCTAGATTCTCTATCAGTGTGAATGGAAGCCAAAAGGGATACTTTAAAGGCAAATGTGGGCTACGTCAAGGTGATCCTCTTTCACCTTATATTTTTGTTCTATGCATGGAAGGCCTTTCAAGAATGCTGAGAAGGCTAAAGGATCAGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9022.p1 GENE.S_Transcript_9022~~S_Transcript_9022.p1 ORF type:3prime_partial len:141 (+),score=29.08,RVT_1|PF00078.23|9e-24 S_Transcript_9022:633-1052(+)
MANKIQEVMEILVGKEQAAFVKSIILFDNVLLAHELSQHYARVHISPRIIMKLNIQKAYDTVRWEFIAMILEAYGFPKEFQERVLTCITTSRFSISVNGSQKGYFKGKCGLRQGDPLSPYIFVLCMEGLSRMLRRLKDQR

Click here to download the sequence:
Link to NCBI Protein BLAST