Transcript Information: S_Transcript_90237.p1


Annotated TAIR IDAT3G29290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb2076
Annotation TypeOrtholog
Chromosome Positionchr3:11238421-11240125 | Forward length=540
E-Value3.5E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.390127148774
Replicate 28.4284814039944
Replicate 39.0585509495695
Condition 2: 8 Hour
Replicate 111.672484908736
Replicate 211.203879254566
Replicate 310.982964817334
Condition 3: 24 Hour
Replicate 16.3115233199149
Replicate 26.0388326190588
Replicate 36.5180564192997


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90237.p1 GENE.S_Transcript_90237~~S_Transcript_90237.p1 ORF type:complete len:623 (+),score=84.42,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|0.0019,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|4.6e-06,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|3.7e-08,PPR|PF01535.16|42,PPR|PF01535.16|0.39,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.00059,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.031,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.007,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|60,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|28,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.29,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|16,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|0.00051,BTAD|PF03704.13|0.58,BTAD|PF03704.13|3.3e+02,BTAD|PF03704.13|55,BTAD|PF03704.13|84,BTAD|PF03704.13|6.3e+02 S_Transcript_90237:257-2125(+)
ATGGCAATGACTATCATGCCTGAGCTATTCACAAATTCGCATGCAAGAATTTTAGCATCAAATGGGTTCCTTTGTCATCAATGTTCGATAAATCAGAGAAGTAAAGTTTGTTCAATAAATCAGTGCAGTAAAGTTTGTTCAATAAATCAGAGCAGTAAAGTTAAGTACTTTATGTGTGTGAATTCAGGGTCACTGAATTTTGAAAAGCAAACTGAACTTGATGAACTTAGCTGTGAAAGCTCACATATTACTACAGTTTCTAAAGTTTATGGAGCAAGTGTACATGGAATTAGTTTATTAAAGAGGTCCATGAAGTCCCAGAAATTTGTCAATTTTAAGCTTATGGTTGCTAATAGTGAAGATGGGTTAGTTTGTGAACAAGGAGACTTTCCATTTATTGGGGAAGAAGAAGAAGAAAATGAAGAAGGGGAAAAACCTTTGTGGGGTGATAGTAAATTAGGCCAAAATTTGGATTTTGGTTTAGCAAGTCCTAAATATGCATCAATAGAAGAGGCATCAATCAATTCAAATAAGGGTGATAGGAAGTTGTATTATCTTGAGGAAAGGAATGAAGAAACATTGTCTAGAAGGATTTTGGCTCTGAGCCGAACCAATAGAAGGGAAAGTGCATTGACATTGTTCAAATCGATGGAGTTTGCAGGATTACAGCCTGACTTACATGCCTGTAATTCATTGTTGTCTTGTCTATCGAGGAATTATATGATCGATGACATGATGACAGTGTTTGGATATATGAATCGGACCAAGGTCATCTCGGGGCACTCATGTAGCTTAATATTAAAAGCTGTGGCTAATTGTCATGGTATTGATGCTGCCCTGCAAATGTTTTCAGAGTTGCGAGGTGATAGTGAGATGGAGGAGCATTTCGATGTGATTGTTTATAATACTATGATATCTGTTTGTGGAAAAGCAAATAGATGGGTTGAAACGAAGATGGTATGGAAATTTATGAAGGATTGTCAAGTCACTGGGACGACAGTTACTTATAGTGTGCTGGTATGTACGTTTGTTCGTTGTGGTCAGTATGAGATTGCTATTGATGCCTATAGTGAGATGCTTCAGAATAAAGTTAAACCTAATTGCGATACCATGCAAGCCATCATAGGAGCCTGTATGAAGGAGGAAAAATGGGAATTGGGTTTAAGTGTGTTCCACAGTATGTTGAAATGTGGACTGAAGCCAAACCTGATTGCCTGCAATGCATTGATCAACTCACTTGGCAAAGTTGGTAAGGTAAGCGAAGCAGTAAAGGTGTACAAACATATAAGATCATTGGGCTATACACCTGATTCATACACGTGGAATGCATTGCTCGGTGCTTTTTATCGGGCCAATCAATATGCCAATGCTCTTCAACTTTTTGACAGCTTATCAATTGATAAGAGCTTCAGACCAAATCTGCATTTATACAACACTGCTCTAATGTGCTGTCAGAGGCTCGGACTTTGGGATAAAGCTCTCCAGTTGTTGTGGAAGATGGAAAAGTCCGGGATATCAGCTCCTACCACGTCATATAATATCGTTATTAGTGCCTGCGAAGTTGCTCGAAAGCCAAAAGTTGCTTTGCAAATCTATGAGCGTATGGCTGATCAGGATTGCACTCCTGATACTTTCACCCATTTGTCCCTACTGAGAAGCTGCATTTGGGGTGATTTATGGAGTGAAGTGGAGGACATTTTGGATGAGTCACCACCTGATGTGTCTCTATACAATGCTGCCATTCATGGAATGTGTCTTAGAGGAAGGATTGAGTTAGCCAAGAAACTATACATGAAAATGCGAGATATTAACCTTACACCTGATGGAAAGACACGAGCATTGATGCTTCAATATATGCAAAAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90237.p1 GENE.S_Transcript_90237~~S_Transcript_90237.p1 ORF type:complete len:623 (+),score=84.42,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|0.0019,PPR_2|PF13041.2|6.6e-11,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|4.6e-06,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|3.7e-08,PPR|PF01535.16|42,PPR|PF01535.16|0.39,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.00059,PPR|PF01535.16|0.0067,PPR|PF01535.16|0.031,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.007,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|60,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.066,PPR_3|PF13812.2|28,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.29,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|16,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|0.00051,BTAD|PF03704.13|0.58,BTAD|PF03704.13|3.3e+02,BTAD|PF03704.13|55,BTAD|PF03704.13|84,BTAD|PF03704.13|6.3e+02 S_Transcript_90237:257-2125(+)
MAMTIMPELFTNSHARILASNGFLCHQCSINQRSKVCSINQCSKVCSINQSSKVKYFMCVNSGSLNFEKQTELDELSCESSHITTVSKVYGASVHGISLLKRSMKSQKFVNFKLMVANSEDGLVCEQGDFPFIGEEEEENEEGEKPLWGDSKLGQNLDFGLASPKYASIEEASINSNKGDRKLYYLEERNEETLSRRILALSRTNRRESALTLFKSMEFAGLQPDLHACNSLLSCLSRNYMIDDMMTVFGYMNRTKVISGHSCSLILKAVANCHGIDAALQMFSELRGDSEMEEHFDVIVYNTMISVCGKANRWVETKMVWKFMKDCQVTGTTVTYSVLVCTFVRCGQYEIAIDAYSEMLQNKVKPNCDTMQAIIGACMKEEKWELGLSVFHSMLKCGLKPNLIACNALINSLGKVGKVSEAVKVYKHIRSLGYTPDSYTWNALLGAFYRANQYANALQLFDSLSIDKSFRPNLHLYNTALMCCQRLGLWDKALQLLWKMEKSGISAPTTSYNIVISACEVARKPKVALQIYERMADQDCTPDTFTHLSLLRSCIWGDLWSEVEDILDESPPDVSLYNAAIHGMCLRGRIELAKKLYMKMRDINLTPDGKTRALMLQYMQKD*

Click here to download the sequence:
Link to NCBI Protein BLAST