Transcript Information: S_Transcript_90371.p1


Annotated TAIR IDAT5G56900.2
Annotated Gene NameCwfJ-like family protein / zinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23019750-23022670 | Reverse length=596
E-Value3.9E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1658588829955
Replicate 23.1986943968144
Replicate 33.1537764306529
Condition 2: 8 Hour
Replicate 14.3602099161424
Replicate 23.8256692841168
Replicate 34.1601561310837
Condition 3: 24 Hour
Replicate 13.370121430705
Replicate 22.443310541688
Replicate 32.3440561714792


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90371.p1 GENE.S_Transcript_90371~~S_Transcript_90371.p1 ORF type:3prime_partial len:538 (+),score=87.18,CwfJ_C_1|PF04677.11|1.7e-38,zf-CCCH|PF00642.20|0.0024,zf-CCCH|PF00642.20|0.028 S_Transcript_90371:82-1692(+)
ATGGCATCTCCTAGAATTCTTCTCTGTGGCGATGTCTTAGGCCGTCTCAATCAGCTCTTCAAACGCTACCATTCGGTGAATAAATCAGCAGGTCCATTCGACGTTCTACTATGCGTAGGGCAGTTCTTTCCAGAATCACCAGACCAGCTCGAAGGTTTCATGGCTTACATTGAAGGCCGCTTGGAAATCCCAATCCCTACTTATTTCATCGGCGATTATGGTGCTGGTGCTCCTAAGGTTCTTATGACGGCTGCTAGGGATCCCGCCAATCTAGGGTTTAAGATGGACGGTTTGAAAGTTTGTCCCAATTTGTTCTGGTTGAAAGGCGGTGGCATGTTCACTCTTCATGGGTTATCTGTGGCATACTTATCTGGTAGGCAATCACCAAGTGGACAGCAATTTGGAACATATAACCAGGATGACATTGACGCATTGCGGGCATTAGCTGAGGAGCCTGGAATAGTTGATCTATTCCTTAGTAATGAATGGCCAAGTGGAGTTACAAACAGAGTTGCAGCTGACGCTCTACCTCCAGGGGCATCTGATTCCCCTGGTTGTGATGCTACTGTAGCAGAATTAGTAGCGGAGATTAAACCACGTTATCAGATTGCGGGCTCAAAGGGTGTCTACTACGCTCGTGAACCCTACTCCAATGTCAATGCTGTGCATGTAACCCGTTTCTTTGGTCTTGCTCCCATTGGAAATAAAGAGAAACAGAAATTTATACATGCACTTTCTCCCACACCAGCCTCGACCATGTCAGCCGCAGAAATTAGCATGAAGCCTCCAAATACAACTTTGTCTCCATACACATTTGATGATAGTACTCTGACCAAGGAGACAACAAAGAGACCAGTGGATAGTACTCTTGATGCGCAATATTGGCGTTATGATGTGAAAAAGCAGAAGCGTGGGGATGGAGATGGGGATAAGCTGTGTTTTAAGTTTCTGTCTTCTGGTTCATGCCAGCGAGGGGAGAACTGTCATTTTCGACATGATGCAGATGCTAGGGAACAATATCTGAGGGGTGTATGTTTTGATTTTCTCAACAAAGGTAAATGTGAAAGAGGACCAGAGTGTCAATTCAAACATAATTTGGTTGATGAAGGTGAAAATGTTTCAAGCAGGAGAGGTAGATCGGGAAGCACAAATGCTAACAGGTCAAAAAAAGAGTGCTGGTTTTGCTTGTCGAGCCCCAATGTTGAGACACATCTAATTATTAGCATTGGAGAAAACATATATTGTGCATTACCAAAAGGCCCACTGGTTGATGATCATGTACTATTGATTCCAGTTGAGCATTCTTCTAGTACTTTGACTTTACATCCAGATGGTCAAAGAGAGCTGCATAGATTTCAAAGTAATCTTCGAATGTTCTGCAAATCCCAAGGCAAAGACATTATTTTCTTTGAATTGATTTCTAAACGAGGCACACATGCTAATCTTCAGGCTATTCCTATTCCACAAACCAAAGCATCTGCTGTGAAAAATATTTTCAACTTAGCTGCTAAAAAGTTGGGATTTGAGTTTCAGACAATCAAAGGTGATAATGGTTCGGAGGCAAGAAAATTGTTGACAACAGAGTTCCGAAGCGTCTCTGGTTTCTTTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90371.p1 GENE.S_Transcript_90371~~S_Transcript_90371.p1 ORF type:3prime_partial len:538 (+),score=87.18,CwfJ_C_1|PF04677.11|1.7e-38,zf-CCCH|PF00642.20|0.0024,zf-CCCH|PF00642.20|0.028 S_Transcript_90371:82-1692(+)
MASPRILLCGDVLGRLNQLFKRYHSVNKSAGPFDVLLCVGQFFPESPDQLEGFMAYIEGRLEIPIPTYFIGDYGAGAPKVLMTAARDPANLGFKMDGLKVCPNLFWLKGGGMFTLHGLSVAYLSGRQSPSGQQFGTYNQDDIDALRALAEEPGIVDLFLSNEWPSGVTNRVAADALPPGASDSPGCDATVAELVAEIKPRYQIAGSKGVYYAREPYSNVNAVHVTRFFGLAPIGNKEKQKFIHALSPTPASTMSAAEISMKPPNTTLSPYTFDDSTLTKETTKRPVDSTLDAQYWRYDVKKQKRGDGDGDKLCFKFLSSGSCQRGENCHFRHDADAREQYLRGVCFDFLNKGKCERGPECQFKHNLVDEGENVSSRRGRSGSTNANRSKKECWFCLSSPNVETHLIISIGENIYCALPKGPLVDDHVLLIPVEHSSSTLTLHPDGQRELHRFQSNLRMFCKSQGKDIIFFELISKRGTHANLQAIPIPQTKASAVKNIFNLAAKKLGFEFQTIKGDNGSEARKLLTTEFRSVSGFFY

Click here to download the sequence:
Link to NCBI Protein BLAST