Transcript Information: S_Transcript_90374.p1


Annotated TAIR IDAT5G56900.2
Annotated Gene NameCwfJ-like family protein / zinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23019750-23022670 | Reverse length=596
E-Value9E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24794721647684
Replicate 20.41110787995369
Replicate 30.80185809059133
Condition 2: 8 Hour
Replicate 10.33113960119772
Replicate 20.62530011725944
Replicate 30.39718970692512
Condition 3: 24 Hour
Replicate 10
Replicate 20.28153803200431
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90374.p1 GENE.S_Transcript_90374~~S_Transcript_90374.p1 ORF type:complete len:322 (+),score=63.50,CwfJ_C_1|PF04677.11|6e-39,zf-CCCH|PF00642.20|0.0013,zf-CCCH|PF00642.20|0.015,Torus|PF16131.1|0.012,Torus|PF16131.1|0.028,Torus|PF16131.1|2.2e+03 S_Transcript_90374:810-1775(+)
ATGTCAGCCGCAGAAATTAGCATGAAGCCTCCAAATACAACTTTGTCTCCATACACATTTGATGATAGTACTCTGACCAAGGAGACAACAAAGAGACCAGTGGATAGTACTCTTGATGCGCAATATTGGCGTTATGATGTGAAAAAGCAGAAGCGTGGGGATGGAGATGGGGATAAGCTGTGTTTTAAGTTTCTGTCTTCTGGTTCATGCCAGCGAGGGGAGAACTGTCATTTTCGACATGATGCAGATGCTAGGGAACAATATCTGAGGGGTGTATGTTTTGATTTTCTCAACAAAGGTAAATGTGAAAGAGGACCAGAGTGTCAATTCAAACATAATTTGGTTGATGAAGGTGAAAATGTTTCAAGCAGGAGAGGTAGATCGGGAAGCACAAATGCTAACAGGTCAAAAAAAGAGTGCTGGTTTTGCTTGTCGAGCCCCAATGTTGAGACACATCTAATTATTAGCATTGGAGAAAACATATATTGTGCATTACCAAAAGGCCCACTGGTTGATGATCATGTACTATTGATTCCAGTTGAGCATTCTTCTAGTACTTTGACTTTACATCCAGATGGTCAAAGAGAGCTGCATAGATTTCAAAGTAATCTTCGAATGTTCTGCAAATCCCAAGGCAAAGACATTATTTTCTTTGAATTGATTTCTAAACGAGGCACACATGCTAATCTTCAGGCTATTCCTATTCCACAAACCAAAGCATCTGCTGTGAAAAATATTTTCAACTTAGCTGCTAAAAAGTTGGGATTTGAGTTTCAGACAATCAAAGGTGATAATGGTTCGGAGGCAAGAAAATTGTTGACAACAGAGTTCCGAAGCGTCTCTGGTTTCTTTTATGTAGAGCTACCTGATGGCACTGTTTTGGGACATGCTATAGATGAAAATGAAATTTTCCCGGTTCAGTTTGGTCGTCCAGGTTATGGCTGGCTTACTCAAAATGCCAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90374.p1 GENE.S_Transcript_90374~~S_Transcript_90374.p1 ORF type:complete len:322 (+),score=63.50,CwfJ_C_1|PF04677.11|6e-39,zf-CCCH|PF00642.20|0.0013,zf-CCCH|PF00642.20|0.015,Torus|PF16131.1|0.012,Torus|PF16131.1|0.028,Torus|PF16131.1|2.2e+03 S_Transcript_90374:810-1775(+)
MSAAEISMKPPNTTLSPYTFDDSTLTKETTKRPVDSTLDAQYWRYDVKKQKRGDGDGDKLCFKFLSSGSCQRGENCHFRHDADAREQYLRGVCFDFLNKGKCERGPECQFKHNLVDEGENVSSRRGRSGSTNANRSKKECWFCLSSPNVETHLIISIGENIYCALPKGPLVDDHVLLIPVEHSSSTLTLHPDGQRELHRFQSNLRMFCKSQGKDIIFFELISKRGTHANLQAIPIPQTKASAVKNIFNLAAKKLGFEFQTIKGDNGSEARKLLTTEFRSVSGFFYVELPDGTVLGHAIDENEIFPVQFGRPGYGWLTQNAR*

Click here to download the sequence:
Link to NCBI Protein BLAST