Transcript Information: S_Transcript_90556.p1


Annotated TAIR IDAT4G30400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14867068-14868486 | Forward length=472
E-Value1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8273533044649
Replicate 27.6426656637143
Replicate 36.8708232468316
Condition 2: 8 Hour
Replicate 14.8783572620893
Replicate 24.2404157552423
Replicate 33.1579033488861
Condition 3: 24 Hour
Replicate 18.709397992982
Replicate 28.7890162540084
Replicate 37.9127982447423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90556.p1 GENE.S_Transcript_90556~~S_Transcript_90556.p1 ORF type:complete len:459 (+),score=100.75,zf-RING_2|PF13639.2|4.3e-14,zf-RING_11|PF17123.1|6.6e-11,zf-rbx1|PF12678.3|3.7e+02,zf-rbx1|PF12678.3|1.3e-09,zf-ANAPC11|PF12861.3|4.8e+03,zf-ANAPC11|PF12861.3|1.2e-06 S_Transcript_90556:254-1630(+)
ATGGGTATTTCTTCTCCACCACCAATGTATTTCTCTCCACCCCCACCATCATCACCATCACCAAACTTCAACTTAGACAGTAAAATAAGTCCAAGCATATTACTCATAATAATAATCTTAGCAATAATATTCTTTGTTTCAGGCCTTCTTCACTTGCTTGTAAGATGCTTATTAAGGCCAAATCAAAGAGACCCAGATGAGATTGACAATGTTACAGCACTTCAAGGTCAATTACAGCAACTTTTCCATCTCCATGATGCTGGTGTTGATCAATCTTATATTGATACCCTCCCAGTTTTTCAGTACAAGGCTATTATTGGTGTCAAAGACCCCTTTGATTGCGCTGTTTGTTTGTGTGAGTTTGAGCCTGATGATAAACTCAGGCTTTTGCCAAAGTGTAGCCATGCTTTTCATATGGATTGTATTGATACTTGGCTTCTTTCTCATTCCACTTGCCCCCTCTGCCGTTCTAGCTTGTTGAGTGATTGTTCTGTGGGGAGTCCTGGAGTTGGGTACAGGAATCCCATTCCCATTGTTTGTGTTCTGGAATCAGGGAGTAGTGTTGAGAGTTCTAGGGAGATCCGGGTATCGGTATCGGAATCAGAATCACATCCGGGTATCATTCAAAGGGATTTGGAGAATGGTTCTGTTAGGAAGGATGAATGTAATAATGATGAGAAGGAGAAAATTGTCACTGTCAAGTTGGGTAAGTTTAGAAATGTGGATGGTGGTGAAGGGAGTAGTTTAGAACATCATCATAGTAATAATGGTGAGAATAGTAATGATGGTGGTGGTGGTGATAATAATAAGGAATTGAACTCGAGAAGGTGTTACTCTATGGGATCATTTGCGTATGTATTGGATGAGAGAACTTCATTACAAGTGCCTATTATGACACCTATGAAAAAGCAAACTAGCAAAAAGCCGAGCTTCCCACTCAAGCCCGGCCACAAGGCTGCAATGTCCGAAAATGGCTCTAATTCCATGAGAGAATTTAACGGGATCGAGGCTTTCAGAAGCATCGATATCTACCAACACGGCAAAGGGAAAGGGAATGAAGATGGCAATGAGAGGAGCAAAAGGGAAAGCTTCTCAATATCCAAGATTTGGCTAAGAGGAGGTGGGGAAAAGAACAGGAAAGGGAATGGGAATGGGAATCATTACTTTTCATCAAGAAGGACAATTTCAGAGATTGAGATTGATGAGAGTGAATTAGAATTAGGAGGAGAAGAAGAAACTCAAAGTTGTTATAGTGTTGATTCTCTTGCAAATCCTGCTTCTTCTACTACTGCTGCTAATAGTACCAGAAAAACTCTGCTTTGGCTTATGGGTAGACACAACAAGATTGTTCATAATCACTCTTCATCCAATGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90556.p1 GENE.S_Transcript_90556~~S_Transcript_90556.p1 ORF type:complete len:459 (+),score=100.75,zf-RING_2|PF13639.2|4.3e-14,zf-RING_11|PF17123.1|6.6e-11,zf-rbx1|PF12678.3|3.7e+02,zf-rbx1|PF12678.3|1.3e-09,zf-ANAPC11|PF12861.3|4.8e+03,zf-ANAPC11|PF12861.3|1.2e-06 S_Transcript_90556:254-1630(+)
MGISSPPPMYFSPPPPSSPSPNFNLDSKISPSILLIIIILAIIFFVSGLLHLLVRCLLRPNQRDPDEIDNVTALQGQLQQLFHLHDAGVDQSYIDTLPVFQYKAIIGVKDPFDCAVCLCEFEPDDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDCSVGSPGVGYRNPIPIVCVLESGSSVESSREIRVSVSESESHPGIIQRDLENGSVRKDECNNDEKEKIVTVKLGKFRNVDGGEGSSLEHHHSNNGENSNDGGGGDNNKELNSRRCYSMGSFAYVLDERTSLQVPIMTPMKKQTSKKPSFPLKPGHKAAMSENGSNSMREFNGIEAFRSIDIYQHGKGKGNEDGNERSKRESFSISKIWLRGGGEKNRKGNGNGNHYFSSRRTISEIEIDESELELGGEEETQSCYSVDSLANPASSTTAANSTRKTLLWLMGRHNKIVHNHSSSNV*

Click here to download the sequence:
Link to NCBI Protein BLAST