Transcript Information: S_Transcript_90642.p1


Annotated TAIR IDAT5G55000.2
Annotated Gene Namepotassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
Annotated Gene Symbol(s)FIP2
Annotation TypeOrtholog
Chromosome Positionchr5:22318644-22321599 | Forward length=298
E-Value1E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9991940592951
Replicate 28.0981915427872
Replicate 37.2491679403748
Condition 2: 8 Hour
Replicate 112.388449288277
Replicate 210.927290231543
Replicate 310.226678330714
Condition 3: 24 Hour
Replicate 17.6393956715662
Replicate 27.0087509788126
Replicate 38.6746337693896


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90642.p1 GENE.S_Transcript_90642~~S_Transcript_90642.p1 ORF type:5prime_partial len:346 (+),score=52.81,Pentapeptide|PF00805.18|2.8e-08,Pentapeptide|PF00805.18|5.4e-08,Pentapeptide|PF00805.18|8.4e-08,Pentapeptide|PF00805.18|6.6e-12,Pentapeptide|PF00805.18|1.1e-11,Pentapeptide_4|PF13599.2|0.0012,Pentapeptide_4|PF13599.2|3.8e-09,Pentapeptide_4|PF13599.2|3.7e-10,BTB_2|PF02214.18|9.8e-19,Pentapeptide_3|PF13576.2|17,Pentapeptide_3|PF13576.2|0.47,Pentapeptide_3|PF13576.2|0.0011,Pentapeptide_3|PF13576.2|0.00013,Pentapeptide_3|PF13576.2|0.00029 S_Transcript_90642:3-1040(+)
GTACGATACTACCAGATCACCCAGAGTAGACGATCTACGCTGCAAAGTCATCTAGCAGGCTGTCGCCTACTTTACCCTCTCTCTCCCTCTGTTTCTATTTCACTTATGGAGCTCACTCCGACCACCGCCGCCACCGCCATGTGTTCCGATTCTTCTTCCATCGTTCGTCTCAACATTGGAGGAAAGAAATATAGCACGACAGTAGATACATTGACGCAACGGGAACCTGAATCAATGCTCGCTGCTATGTTTAGTGGCCGTCACACTCTTTGCCAAGACCCTCTCAAGGGTTATGTGTTTGTTGACAGAGATGGCAAACATTTTCGGCATATCTTGAATTGGTTGAGGGATGGAGTTGTGCCCACACTAAAGGACTTGGAATATGCTGAGCTGTTGCGTGAAGCAGAATATTATCAACTACTTGGATTGATAGAGGGAATCAATGTGGCCTTAAATAAGAGAAAAGAGGAAGAAGACTTGACTAGTGAATTAACTCGTCGCGACATTATCAAGTGCATACAATCAGAGAGAGTTAAATTTCGAGGAGTCAATCTGTCTGGCCTCGACCTTTCCAAATTGGACCTTTCATATGTGGACTTCAGCCATGCTTGTCTTAAGGGTGTCTTCTTCTCACGGGCATACCTTCAATGTGCAAAATTTCGGGATGTGGATGGTGAGGGTTCAATTTTCCATAATGCGACTCTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGAGCTTTACTTGCTGGGTCTAATCTGCAAAGTGCAAACTTACAAGATGCTTGTTTGATTGATTGTAGCTTCTGTACAGCAGATCTGCGTTCTGCCCACTTGCAGGGTGCAGATCTTACTAATGCCAACTTAGAGGGGGCAAACCTGGAAGGTGCTAACTTGAAGGGGGCAAAGCTGACTAATGCCAACCTAAAAGGGGCCAACCTTCAAAGAGCTTACTTGCGACATGTCAATCTTCGGGAAACACATTTGGAAGGTGCAAAGCTTGATGGCGCCAACTTGCTTGGAGCAATCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90642.p1 GENE.S_Transcript_90642~~S_Transcript_90642.p1 ORF type:5prime_partial len:346 (+),score=52.81,Pentapeptide|PF00805.18|2.8e-08,Pentapeptide|PF00805.18|5.4e-08,Pentapeptide|PF00805.18|8.4e-08,Pentapeptide|PF00805.18|6.6e-12,Pentapeptide|PF00805.18|1.1e-11,Pentapeptide_4|PF13599.2|0.0012,Pentapeptide_4|PF13599.2|3.8e-09,Pentapeptide_4|PF13599.2|3.7e-10,BTB_2|PF02214.18|9.8e-19,Pentapeptide_3|PF13576.2|17,Pentapeptide_3|PF13576.2|0.47,Pentapeptide_3|PF13576.2|0.0011,Pentapeptide_3|PF13576.2|0.00013,Pentapeptide_3|PF13576.2|0.00029 S_Transcript_90642:3-1040(+)
VRYYQITQSRRSTLQSHLAGCRLLYPLSPSVSISLMELTPTTAATAMCSDSSSIVRLNIGGKKYSTTVDTLTQREPESMLAAMFSGRHTLCQDPLKGYVFVDRDGKHFRHILNWLRDGVVPTLKDLEYAELLREAEYYQLLGLIEGINVALNKRKEEEDLTSELTRRDIIKCIQSERVKFRGVNLSGLDLSKLDLSYVDFSHACLKGVFFSRAYLQCAKFRDVDGEGSIFHNATLRECEFTGANLRGALLAGSNLQSANLQDACLIDCSFCTADLRSAHLQGADLTNANLEGANLEGANLKGAKLTNANLKGANLQRAYLRHVNLRETHLEGAKLDGANLLGAIR*

Click here to download the sequence:
Link to NCBI Protein BLAST