Transcript Information: S_Transcript_90661.p1


Annotated TAIR IDAT1G78900.1
Annotated Gene Namevacuolar ATP synthase subunit A
Annotated Gene Symbol(s)VHA-A
Annotation TypeOrtholog
Chromosome Positionchr1:29660463-29664575 | Forward length=623
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1183.04968157275
Replicate 2215.57183963488
Replicate 3202.21987224999
Condition 2: 8 Hour
Replicate 1222.31035899511
Replicate 2229.66997177258
Replicate 3255.48273115009
Condition 3: 24 Hour
Replicate 1247.57534622673
Replicate 2255.54900360766
Replicate 3248.29970958434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90661.p1 GENE.S_Transcript_90661~~S_Transcript_90661.p1 ORF type:complete len:624 (+),score=156.04,ATP-synt_ab|PF00006.21|2.9e-107,ATP-synt_ab_Xtn|PF16886.1|1.4e-40,ATP-synt_ab_C|PF00306.23|4.5e-26,ATP-synt_ab_N|PF02874.19|3.6e-13 S_Transcript_90661:165-2036(+)
ATGCCTTCGATGTACGGAGAGCGCATGACCACATTCGAGGATTCAGAGAAGGAGACCGAGTATGGTTACATTCGTAAGGTGTCAGGTCCCGTCGTTGTTGCAGATGGAATGGCTGGTGCTGCTATGTATGAATTGGTTCGTGTCGGACATGATAATCTTATTGGAGAAATTATTAGATTAGAAGGAGACTCTGCCACCATCCAAGTTTATGAAGAAACTGGTGGGTTGATGGTCAACGATCCTGTTCTTCGTACTCACAAGCCATTGTCAGTTGAGCTTGGACCCGGTATTTTGGGGAATATATTTGATGGTATTCAGAGACCACTGAAAACCATTGCCAAAAGATCTGGTGATGTCTATATTCCTCGTGGTGTCGCTGTGCCACCATTGGACAAAGACATCCTCTGGGAATTTCAGCCTAAGAAGATAGGTGAAGGAGATGTTTTGACTGGTGGCGATCTATATGCTGAAGTTTTTGAGAACAGTCTCATGGCTCATCATGTGGCCCTTCCACCTGATGCTATGGGCAAGATCACCTACGTTGCACCTCCAGGGCAATACTCTCTCAAGGACACTGTCCTAGAACTTGAGTTTCAGGGTGTGAAGAAGCAATTTACCATGCTCCAGTCTTGGCCCGTTCGTACACCCAGGCCCGTTGCATCAAAACTTGCTGCTGACACCCCTCTATTGACTGGGCAGCGTGTTCTTGATGCTCTCTTCCCCTCAGTTCTTGGTGGAACATGTGCCATTCCTGGGGCTTTTGGTTGTGGAAAAACTGTTATTAGTCAAGCACTTTCCAAGTACTCTAACTCAGATGCTGTCGTTTACGTCGGTTGTGGAGAGAGAGGAAATGAAATGGCTGAGGTGCTCATGGACTTTCCTCAATTAACAATGACATTGCCCGATGGACGTGAAGAATCTGTTATGAAGCGTACTACTCTTGTGGCCAACACTTCCAACATGCCTGTGGCTGCACGTGAGGCGTCCATCTACACAGGGATTACAATAGCTGAATATTTCAGAGACATGGGATACAATGTTAGTATGATGGCAGATTCAACATCACGATGGGCTGAAGCTTTGCGTGAAATTTCAGGACGATTGGCTGAAATGCCTGCAGATAGTGGATATCCTGCTTATCTGGCTGCTCGTTTAGCTTCTTTCTATGAACGTGCTGGTAAAGTTAAGTGTCTTGGTGGTCCAGAACGTTCTGGCAGTGTCACAATTGTTGGTGCTGTTTCACCTCCTGGAGGAGATTTCTCTGATCCTGTTACATCTGCAACACTGAGTATTGTCCAGGTTTTCTGGGGTTTGGATAAGAAGCTGGCCCAGAGGAAGCATTTCCCCTCAGTCAACTGGCTTATTTCTTACTCCAAGTATACATCGGCTCTGGAATCATATTATGAGAAATTTGATCCTGATTTCATCAACATCAGGACCAAGGCCCGTGAGGTGCTGCAGAGAGAAGATGATCTGAATGAAATTGTCCAGCTTGTCGGAAAAGATGCTTTGGCTGAAACAGACAAAATCACTTTGGATACTGCAAAGCTTTTGAGGGAAGACTACCTTGCTCAAAATGCTTTCACACCGTATGACAAATTTTGCCCCTTCTACAAGTCAGTTTGGATGATGCGCAACATAATCCATTTCTTTAATTTGGCTAATCAGTCGGTGGAGCGCGGTGCTGGTTCAGATGGTCAAAAGATCACCTACAGCTTGATCAAGCTTCGGCTCGGAGATCTCTTTTACCGTCTAGTGTCTCAGAAATTCGAGGATCCCGCTGAAGGAGAAGATGTTCTTATTGCGAAATTCCAGAAGCTGCATGATGATCTTTCTGCAGCTTTCCGCAATCTTGAGGACGAAATGCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90661.p1 GENE.S_Transcript_90661~~S_Transcript_90661.p1 ORF type:complete len:624 (+),score=156.04,ATP-synt_ab|PF00006.21|2.9e-107,ATP-synt_ab_Xtn|PF16886.1|1.4e-40,ATP-synt_ab_C|PF00306.23|4.5e-26,ATP-synt_ab_N|PF02874.19|3.6e-13 S_Transcript_90661:165-2036(+)
MPSMYGERMTTFEDSEKETEYGYIRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETGGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVAVPPLDKDILWEFQPKKIGEGDVLTGGDLYAEVFENSLMAHHVALPPDAMGKITYVAPPGQYSLKDTVLELEFQGVKKQFTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERSGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYTSALESYYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFFNLANQSVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDVLIAKFQKLHDDLSAAFRNLEDEMR*

Click here to download the sequence:
Link to NCBI Protein BLAST