Transcript Information: S_Transcript_90673.p1


Annotated TAIR IDAT1G77140.1
Annotated Gene Namevacuolar protein sorting 45
Annotated Gene Symbol(s)VPS45, ATVPS45
Annotation TypeOrtholog
Chromosome Positionchr1:28984163-28987681 | Forward length=569
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.053811031247
Replicate 225.048439462486
Replicate 321.003326857949
Condition 2: 8 Hour
Replicate 124.923347207194
Replicate 222.882980506715
Replicate 323.338792720393
Condition 3: 24 Hour
Replicate 125.146570626255
Replicate 223.2214449016
Replicate 321.941848823431


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90673.p1 GENE.S_Transcript_90673~~S_Transcript_90673.p1 ORF type:complete len:569 (+),score=105.00,Sec1|PF00995.19|2.9e-114 S_Transcript_90673:146-1852(+)
ATGGTGTTAGTAACGGCAGTTCGAGACTACATCAATCGAATGCTCCAAGACATCTCCGGCATGAAAGTCCTCATTCTCGATTCTCAGACGGTTAGTGTTGTAAGTGTTGTCTATAGCCAGTCAGACTTACTGAAGAAGGAAGTGTTTTTAGTAGAATTGGTAGACTCGATTTCCATGTCAAAAGAATCCATGTCGCATCTGAAAGCTGTGTACTTCCTTAGACCCACATCAGAAAATATTCAGCGTTTGAGGCGTCAGCTTGCTAGTCCTAGATTTGGGGAGTATCACCTCTTTTTTTCCAATATATTGAAGGATGAACATATTCACAATTTAGCAGATTCAGATGAACATGAAGCTGTGCAACAAGTTCTGGAATTTTATGCAGATTTCATTGCTGTTGATCCTTGCCATTTCAGTCTCCATATTTCTTCAAATCACCTATATATGGTTCCAGCTTCAGTCGACTTTTCAAATTTGCAAAATTATTGTGATCGAATAGTTGATGGGGTTTCAGCAGTTTTCTTGGCACTAAAACGCCGGCCAATCATCCGATACCAGCGAACATCTGATATTGCTAAAAGGATAGCCCAGGAAACTGCGAAATTGATGTATCAGCAGGAGAGTGGTCTCTTTGATTTTAGAAGGACGGAAATTTCTCCGTTGTTGCTTGTATTAGATAGGCGAGAAGACCCTGTTACTCCGTTGTTAAATCAGTGGACATATCAGGCAATGGTTCATGAGTTGATAGGAATCCAAGATAACAAAGTGGATTTGAGGACAGTTGGAAAGCTTCCAAAAGACCAGCAGGAGGTTGTGCTGTCTTCAGAGCAAGACGCTTTCTTCAAAGCCAACATGTACGAGAACTTTGGGGACATTGGAATGAATATCAAGAAAATGGTGGATGACTTCCAGCAAATTGCAAGAAGTAACCAGAACATCCAGACAATAGAGGACATGGCTAAATTTGTTGATAATTACCCTGAGTACAGAAAAATGCATGGTAATGTTTCAAAGCATGTGACACTAGTAACAGAGATGAGCAAGATAGTTGAGGAGAGGAAGCTTATGACAGTCTCTCAAACAGAACAAGAGCTTGCTTGCAATGGAGGACAAGGAGCAGCATTTGAGGCTGTAACAAATCTTCTAAACAATGAGCAAGTGTCAGATATAGATCGTCTACGGTTGGTAATGTTGTATGCTTTGCGCTATGAGAAGGAAAGTCCAGTTCAACTGATGCAACTTTTCAACAAGCTGGCTTCCAAGTCTCCAAAGTACAAGCCTGGGCTTGTGCAGTTTCTTCTGAAGCAAGCAGGTGTTGACAAGCGTACTGGGGACTTGTTTGGAAATAGGGATCTATTGAATATTGCACGTAATATGGCTCGTGGACTTAAGGGTGTGGAGAATGTGTATACACAACACCAGCCTCTGCTGTTTCAGACAATGGAGAGCATTTCCAAGGGGCGTTTGAGGGACGTTGACTACCCCTTCGTGGGAAATCACTTTCAGCAGGGCAGGCCACAGGATGTTGTCATTTTTGTTGTTGGTGGGACGACTTATGAGGAGTCACGTTCCGTTGCTCTGCTAAATGCCAGCAATTCTGGGATTCGATTTATTCTTGGAGGCACAACAATTCTCAACTCTAAGAGGTTCTTGAAAGACCTTGAAGAGGCTCATAGACTACTACGTTCCAGCAGCACTGTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90673.p1 GENE.S_Transcript_90673~~S_Transcript_90673.p1 ORF type:complete len:569 (+),score=105.00,Sec1|PF00995.19|2.9e-114 S_Transcript_90673:146-1852(+)
MVLVTAVRDYINRMLQDISGMKVLILDSQTVSVVSVVYSQSDLLKKEVFLVELVDSISMSKESMSHLKAVYFLRPTSENIQRLRRQLASPRFGEYHLFFSNILKDEHIHNLADSDEHEAVQQVLEFYADFIAVDPCHFSLHISSNHLYMVPASVDFSNLQNYCDRIVDGVSAVFLALKRRPIIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVLDRREDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTVGKLPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKKMVDDFQQIARSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERKLMTVSQTEQELACNGGQGAAFEAVTNLLNNEQVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLASKSPKYKPGLVQFLLKQAGVDKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESISKGRLRDVDYPFVGNHFQQGRPQDVVIFVVGGTTYEESRSVALLNASNSGIRFILGGTTILNSKRFLKDLEEAHRLLRSSSTVV*

Click here to download the sequence:
Link to NCBI Protein BLAST