Transcript Information: S_Transcript_90674.p1


Annotated TAIR IDAT1G77140.1
Annotated Gene Namevacuolar protein sorting 45
Annotated Gene Symbol(s)VPS45, ATVPS45
Annotation TypeOrtholog
Chromosome Positionchr1:28984163-28987681 | Forward length=569
E-Value2.9E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73925003431057
Replicate 20.47666520648952
Replicate 30.62614227444323
Condition 2: 8 Hour
Replicate 11.1189248005903
Replicate 20.89763590221125
Replicate 31.4473723682395
Condition 3: 24 Hour
Replicate 10.74164727900165
Replicate 20.6295503215652
Replicate 30.46707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90674.p1 GENE.S_Transcript_90674~~S_Transcript_90674.p1 ORF type:complete len:324 (+),score=44.12,Sec1|PF00995.19|4.8e-55 S_Transcript_90674:146-1117(+)
ATGGTGTTAGTAACGGCAGTTCGAGACTACATCAATCGAATGCTCCAAGACATCTCCGGCATGAAAGTCCTCATTCTCGATTCTCAGACGGTTAGTGTTGTAAGTGTTGTCTATAGCCAGTCAGACTTACTGAAGAAGGAAGTGTTTTTAGTAGAATTGGTAGACTCGATTTCCATGTCAAAAGAATCCATGTCGCATCTGAAAGCTGTGTACTTCCTTAGACCCACATCAGAAAATATTCAGCGTTTGAGGCGTCAGCTTGCTAGTCCTAGATTTGGGGAGTATCACCTCTTTTTTTCCAATATATTGAAGGATGAACATATTCACAATTTAGCAGATTCAGATGAACATGAAGCTGTGCAACAAGTTCTGGAATTTTATGCAGATTTCATTGCTGTTGATCCTTGCCATTTCAGTCTCCATATTTCTTCAAATCACCTATATATGGTTCCAGCTTCAGTCGACTTTTCAAATTTGCAAAATTATTGTGATCGAATAGTTGATGGGGTTTCAGCAGTTTTCTTGGCACTAAAACGCCGGCCAATCATCCGATACCAGCGAACATCTGATATTGCTAAAAGGATAGCCCAGGAAACTGCGAAATTGATGTATCAGCAGGAGAGTGGTCTCTTTGATTTTAGAAGGACGGAAATTTCTCCGTTGTTGCTTGTATTAGATAGGCGAGAAGACCCTGTTACTCCGTTGTTAAATCAGTGGACATATCAGGCAATGGTTCATGAGTTGATAGGAATCCAAGATAACAAAGTGGATTTGAGGACAGTTGGAAAGCTTCCAAAAGACCAGCAGGTAAGTCTAGCTTCTGAATCTGGTTATGCTACTTTAGTCATCGCACTGGAGCTCACTTGCTTTTTAGGAGGTTGTGCTGTCTTCAGAGCAAGACGCTTTCTTCAAAGCCAACATGTACGAGAACTTTGGGGACATTGGAATGAATATCAAGAAAATGGTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90674.p1 GENE.S_Transcript_90674~~S_Transcript_90674.p1 ORF type:complete len:324 (+),score=44.12,Sec1|PF00995.19|4.8e-55 S_Transcript_90674:146-1117(+)
MVLVTAVRDYINRMLQDISGMKVLILDSQTVSVVSVVYSQSDLLKKEVFLVELVDSISMSKESMSHLKAVYFLRPTSENIQRLRRQLASPRFGEYHLFFSNILKDEHIHNLADSDEHEAVQQVLEFYADFIAVDPCHFSLHISSNHLYMVPASVDFSNLQNYCDRIVDGVSAVFLALKRRPIIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVLDRREDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTVGKLPKDQQVSLASESGYATLVIALELTCFLGGCAVFRARRFLQSQHVRELWGHWNEYQENGG*

Click here to download the sequence:
Link to NCBI Protein BLAST