Transcript Information: S_Transcript_90680.p2


Annotated TAIR IDAT1G77140.1
Annotated Gene Namevacuolar protein sorting 45
Annotated Gene Symbol(s)VPS45, ATVPS45
Annotation TypeOrtholog
Chromosome Positionchr1:28984163-28987681 | Forward length=569
E-Value7.6E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7745191359354
Replicate 24.579069530805
Replicate 37.4814872791965
Condition 2: 8 Hour
Replicate 17.8461341732848
Replicate 211.185924319863
Replicate 38.2448089792852
Condition 3: 24 Hour
Replicate 111.128525551812
Replicate 28.7661912700966
Replicate 37.1383144542781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90680.p2 GENE.S_Transcript_90680~~S_Transcript_90680.p2 ORF type:complete len:106 (+),score=6.46,Sec1|PF00995.19|1.1e-16 S_Transcript_90680:146-463(+)
ATGGTGTTAGTAACGGCAGTTCGAGACTACATCAATCGAATGCTCCAAGACATCTCCGGCATGAAAGTCCTCATTCTCGATTCTCAGACGGTTAGTGTTGTAAGTGTTGTCTATAGCCAGTCAGACTTACTGAAGAAGGAAGTGTTTTTAGTAGAATTGGTAGACTCGATTTCCATGTCAAAAGAATCCATGTCGCATCTGAAAGCTGTGTACTTCCTTAGACCCACATCAGAAAATATTCAGCGTTTGAGGCGTCAGCTTGCTAGTCCTAGATTTGGGGAGTATCACCTCTTTTTTTTCCAATATATTGAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90680.p2 GENE.S_Transcript_90680~~S_Transcript_90680.p2 ORF type:complete len:106 (+),score=6.46,Sec1|PF00995.19|1.1e-16 S_Transcript_90680:146-463(+)
MVLVTAVRDYINRMLQDISGMKVLILDSQTVSVVSVVYSQSDLLKKEVFLVELVDSISMSKESMSHLKAVYFLRPTSENIQRLRRQLASPRFGEYHLFFFQYIEG*

Click here to download the sequence:
Link to NCBI Protein BLAST