Transcript Information: S_Transcript_90729.p1


Annotated TAIR IDAT3G46870.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17263011-17264022 | Forward length=257
E-Value4E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.27340121211
Replicate 26.7323953429181
Replicate 38.4755220972429
Condition 2: 8 Hour
Replicate 19.4082604340293
Replicate 28.7184410140111
Replicate 310.187721281793
Condition 3: 24 Hour
Replicate 110.039008957075
Replicate 28.3322836677748
Replicate 39.9219071740714


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90729.p1 GENE.S_Transcript_90729~~S_Transcript_90729.p1 ORF type:complete len:272 (+),score=55.92,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.0047,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.094,PPR|PF01535.16|0.011 S_Transcript_90729:538-1353(+)
ATGGTGAAGTCATTAAAGAGTAGTCATCTGATGTTAACTCGAATACTTTCAAGGGCGAGATCTCCATCTTCAGCCTCTACAATCCTTTCACACTTGAGTGTAACTTTACCCGTTGACCAGCCTTTAAACCCATTGTTGCTGAACCCCAAAGCACTAAGGTCTGAGCCCAATTCGTCTGCAAATGGGATTTTCTTATATTGCAGGAGAGATTATCATGATGGCAGACCAAGGGGGCACCTTTGGCGGGGAAAAAAGTTGATTGGCAAAGAGGCTCTTTTTGTGATTTTAGGTATGAAGAGGTTTAAGGATGATGAAGAGAAGCTTGCTCAGTTCATTAAAAATCATGTGCTGAGACTGTTAAAGTGGGATATGATTGCTGTCCTAACAGAACTTGAGCGCCAAGAGGAGGTTGCGTTGTCCCTTAAGATTTTCAGGGTGATTCAAAAGCAGGATTGGTATCAGCCTGATATTTATCTCTACAAAGACTTGATTATTGCATCAGCAAGAAATAAAAGAATGGATGATGTGACCCATTTGTGGGACGAGATGAAAAAGGCAAATTTGTTTCCAGATTCTCAAACATATACAGAGGTGATCAGGGGCTTCTTAAGGGACGGTTCGCCTGCAGATGCAATGAACATATATGAGGACATGCTGAAGTCTCCAGATCCACCAGAGGAACTTCCGTTTAGGATTTTATTGAAGGGACTTTTGCCTCATCCCCTTTTGAGGAACAAAGTCAAGAAGGATTTTGAGGAGCTCTTTCCTGAGCACTCAGTTTATGATCCTCCAGAGGAGATATTTGGGGTGCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90729.p1 GENE.S_Transcript_90729~~S_Transcript_90729.p1 ORF type:complete len:272 (+),score=55.92,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|0.0047,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.094,PPR|PF01535.16|0.011 S_Transcript_90729:538-1353(+)
MVKSLKSSHLMLTRILSRARSPSSASTILSHLSVTLPVDQPLNPLLLNPKALRSEPNSSANGIFLYCRRDYHDGRPRGHLWRGKKLIGKEALFVILGMKRFKDDEEKLAQFIKNHVLRLLKWDMIAVLTELERQEEVALSLKIFRVIQKQDWYQPDIYLYKDLIIASARNKRMDDVTHLWDEMKKANLFPDSQTYTEVIRGFLRDGSPADAMNIYEDMLKSPDPPEELPFRILLKGLLPHPLLRNKVKKDFEELFPEHSVYDPPEEIFGVR*

Click here to download the sequence:
Link to NCBI Protein BLAST