Transcript Information: S_Transcript_90847.p1


Annotated TAIR IDAT1G24620.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8723893-8724453 | Reverse length=186
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 181.005310532581
Replicate 286.141568790297
Replicate 3100.00224625411
Condition 2: 8 Hour
Replicate 167.714486385478
Replicate 278.791690029954
Replicate 374.647928465253
Condition 3: 24 Hour
Replicate 180.59108411271
Replicate 272.596432300332
Replicate 374.761757121141


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90847.p1 GENE.S_Transcript_90847~~S_Transcript_90847.p1 ORF type:5prime_partial len:251 (+),score=51.59,EF-hand_7|PF13499.2|3e-10,EF-hand_7|PF13499.2|6.3e-11,EF-hand_1|PF00036.28|0.00023,EF-hand_1|PF00036.28|0.00013,EF-hand_1|PF00036.28|1.6e+04,EF-hand_1|PF00036.28|1.4e-05,EF-hand_1|PF00036.28|2.5e-07,EF-hand_5|PF13202.2|8.5e-07,EF-hand_5|PF13202.2|0.043,EF-hand_5|PF13202.2|1.6e+04,EF-hand_5|PF13202.2|0.00082,EF-hand_5|PF13202.2|0.002,EF-hand_6|PF13405.2|0.00047,EF-hand_6|PF13405.2|0.084,EF-hand_6|PF13405.2|5.3e+03,EF-hand_6|PF13405.2|1.6e+04,EF-hand_6|PF13405.2|3e-06,EF-hand_6|PF13405.2|0.0033,EF-hand_8|PF13833.2|0.13,EF-hand_8|PF13833.2|0.013,EF-hand_8|PF13833.2|5,EF-hand_8|PF13833.2|4.9e-09 S_Transcript_90847:2-754(+)
AACTCTGCTATTCCTAAACTCCTTTCGTTATTCTTCACTCTCTATTTTCCTCTCTTAATATTATTATTAACCATGCTACACTCCCTTAGAAACTGCTTTAAATCAGCCAAAACTGTTGTTAATCAACTTAATTTAATCCACAAAGTGATTAAGAGAGTCAAGAGGAACAAAACCAAGAGGGTATTTTCAGGGTTTGAAGGCCTGAAATCGTCCTTTGGGAGCATGGAATTAAGCAATCAATTAGAAATGGTGTTTAAATTCATTGATGCAAATGGAGATGGTAAGATATCTCCCCTTGAACTTAGTGAATTTCTCTTGTGTCTTGGCCATGACAAGTCTAAAGCAGCTGAAGAAGCTCAAGGCATGCTTAAACACTTGGACTCTAATGGGGATGGCTTTGTTGATTTGAATGAGTACATGGAAGCTGTCATGATGGGCAGTAGTAGTGATGATGATGATGATGATGGTAAAGGTTATGATCATCATAACCATCATCATCATGATGGCTATGATCATCACCATGATGATCATGATGGTTTAAACGATGATCTTATGGATGCTTTCCTTGTGTTTGATTCTGATAAAAATGGGTTGATTTCAGCTAGAGAGTTACAACAAGTTTTAAAGAGACTTGGGTTTGCTAATTGTAGTCTTAAGGAATGTAATCTTATGATTAAAGGGGTTGATAAAGATGGAGATGGGTATGTCAATTTTGATGAATTTAGACTTATGATGATGGGTTATGGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90847.p1 GENE.S_Transcript_90847~~S_Transcript_90847.p1 ORF type:5prime_partial len:251 (+),score=51.59,EF-hand_7|PF13499.2|3e-10,EF-hand_7|PF13499.2|6.3e-11,EF-hand_1|PF00036.28|0.00023,EF-hand_1|PF00036.28|0.00013,EF-hand_1|PF00036.28|1.6e+04,EF-hand_1|PF00036.28|1.4e-05,EF-hand_1|PF00036.28|2.5e-07,EF-hand_5|PF13202.2|8.5e-07,EF-hand_5|PF13202.2|0.043,EF-hand_5|PF13202.2|1.6e+04,EF-hand_5|PF13202.2|0.00082,EF-hand_5|PF13202.2|0.002,EF-hand_6|PF13405.2|0.00047,EF-hand_6|PF13405.2|0.084,EF-hand_6|PF13405.2|5.3e+03,EF-hand_6|PF13405.2|1.6e+04,EF-hand_6|PF13405.2|3e-06,EF-hand_6|PF13405.2|0.0033,EF-hand_8|PF13833.2|0.13,EF-hand_8|PF13833.2|0.013,EF-hand_8|PF13833.2|5,EF-hand_8|PF13833.2|4.9e-09 S_Transcript_90847:2-754(+)
NSAIPKLLSLFFTLYFPLLILLLTMLHSLRNCFKSAKTVVNQLNLIHKVIKRVKRNKTKRVFSGFEGLKSSFGSMELSNQLEMVFKFIDANGDGKISPLELSEFLLCLGHDKSKAAEEAQGMLKHLDSNGDGFVDLNEYMEAVMMGSSSDDDDDDGKGYDHHNHHHHDGYDHHHDDHDGLNDDLMDAFLVFDSDKNGLISARELQQVLKRLGFANCSLKECNLMIKGVDKDGDGYVNFDEFRLMMMGYGR*

Click here to download the sequence:
Link to NCBI Protein BLAST