Transcript Information: S_Transcript_90904.p1


Annotated TAIR IDAT5G27220.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9578757-9582752 | Forward length=1181
E-Value2.6E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8345208416168
Replicate 23.1658144779274
Replicate 33.0556012446202
Condition 2: 8 Hour
Replicate 12.4921683950496
Replicate 22.4489893481358
Replicate 32.1126653691328
Condition 3: 24 Hour
Replicate 11.3572264890606
Replicate 21.9780545606575
Replicate 32.0147786950832


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90904.p1 GENE.S_Transcript_90904~~S_Transcript_90904.p1 ORF type:5prime_partial len:676 (+),score=175.27,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.1e+04,Frigida|PF07899.7|1.5e+04,Frigida|PF07899.7|3.3e-60 S_Transcript_90904:2-2029(+)
GAGAAGGAAGTCGATGAACGTTATCGAGTTGTGGGAGTGAAGGAGAAGGAAGTCGATGAACGTTCTCGAGTTGTGGGAGTGAAGGAGAAGGAAGTCGATGAACGTTCTCGAGTTGTGGAAGTGAAGGAGAAGGAAGTCGATGAACGTTCTCAAGTCGCGGAATTGAAGGAGAGGGAAGTCAATAAACGTTCTCTAGTTGTGGTATTGAAGGAGAAGGAAGCGAATGAGTCTCTTCATGCATTGGATTCGAAAGTTGATCAATTAGATCAGCGTCAGAATGATTTGGAGGTGAAGAAGAAGGAAGTTGAGGATCATTGCAAAGCAATGGAGGAGAAAGAGAAGCAACTTGTTAGGCGTAGTAAAGTTCTAGATTGGAAGGACAAGAAAATTGACGAGTGTAGCAGAGGGCTAGAATTGAAAGAGAGTGAAGTCAATAAACGATACCAAGAGATTGAATTGAAAGAGAAGGAAATGAATGAAGCACAAGAGTTGAAAGAGAAGCAATTGAAAGAGGCTCTTGATACCCTGGAACTGAAAACAAAACAACTAGAAGAACATTGCCAAAAGACAGCGTTGAAAGAGAAGAAGATCAATGAGCTTTACCAAGTAATAGAGACAAATGAACAGCAAATGACTATGCGTGTCAACGCTCTATTCTTGAGTTTAGAGTTGAAAGAGAAAGATGCCAATGAACTTAGCAAAGAGCTAGAATTGAAAGACAAGGAAATGAGTGATTTGCGCCAATCACAAAAATTGAAAGAGAAGCAATTGAAAGTTGCTCTTGAAAACCTTGAGTTGAAAACAAAACAACTAGAAGAACAAAGCCACAAGACAGAATTGAAGGAGAAGGAAATCAGTGAGCATCACCAAGCATTAGAGATGAAGGAAAAGCAATTGAATATGCGTAGCAAAGGGCTTGATTTGAAGGAGAAAGATGTCAATGAGCGATGCCAAGAACTTGAACTAAAAGCACAAAAGTTAAAAGAGAACCAAATGCAAGGGGGTTGCAATCATTGTGAAATTCGTTGCTTTTGTAGAAGAATGGATGCAAATGGTTTGATATCATATCTAATTGCCCATGTGAATGAGCACGATAAGCTGCATAGTGAGCTTTTGGATGCTCTCAGAATTGCATCTGATCCCGCAAAGCTTGTTCTTGATGTTTGTCGGTATTCCCACGAATCAAACTTCAATGAGGTTCTTGCAGATCATCACAAAACCAGCTGTATAATTCTTTTGGAGATGTTGGCAAAGTTAGAACCAGAGTTGGAACCTGAAATCAAAGATGAAGCAAGAAGCTTTGCCGCTGTATGGAGAGCTAGTTTGAAGAATATCAACCCTAATGTGGATACTTATGGGTTTTTGCAGTTTTTAGCAGCATATGACTTAGCAGGTTCATACAAAGTGGAGGAGCTTCTTTCACTTTTTAAGAACTTCTATCGTGTGCCTGAGGTTTATCGTTGTGAGCAACACATGAAGCTATGCTGTTCTTTGGGAATTGTACATAGGATGCCAGGACTGATCAGATCTCTAATTAGCAGTCAGAAGCGGCTTCAAGCAATTAAGTACATATGTGTATTTGATTTGGATTCTATTTTCCCACCAGGTTCTCTTCTAAACGAACATGTGGGGTTTGTAAAGCAAAAGGCAAAGGAGAAACTCAAGGGTGGAACTTTTAAAGCAAAGGGTGAGGCATTGGACTATGAACATACTGCTCTTGTAGCTGTATTAAAATGCATTTCACAGTTCACCCTCCTGTCACAATTCCAATCCAAGCACATTGAACAGCGAATCAAGCAAATCGAAGTCGAAATGGAGAAACGATGTAAGGGTAGTGTTGCACACATTGAGCAATCGACAAATCAGATAAATTCTGGAAACTCCAAACACAAGATGGCAGAAGTCAACATCAATTCACAAGCGGATAGACAGGCTGGGAAGAAACGCATTGCAAGGCCGAGTATAGCATCTGTAGGATCTCCAGACTCTCAAGCAAAGCGTCCCCGAATAGGGGCTGCAAAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90904.p1 GENE.S_Transcript_90904~~S_Transcript_90904.p1 ORF type:5prime_partial len:676 (+),score=175.27,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.6e+04,Frigida|PF07899.7|1.1e+04,Frigida|PF07899.7|1.5e+04,Frigida|PF07899.7|3.3e-60 S_Transcript_90904:2-2029(+)
EKEVDERYRVVGVKEKEVDERSRVVGVKEKEVDERSRVVEVKEKEVDERSQVAELKEREVNKRSLVVVLKEKEANESLHALDSKVDQLDQRQNDLEVKKKEVEDHCKAMEEKEKQLVRRSKVLDWKDKKIDECSRGLELKESEVNKRYQEIELKEKEMNEAQELKEKQLKEALDTLELKTKQLEEHCQKTALKEKKINELYQVIETNEQQMTMRVNALFLSLELKEKDANELSKELELKDKEMSDLRQSQKLKEKQLKVALENLELKTKQLEEQSHKTELKEKEISEHHQALEMKEKQLNMRSKGLDLKEKDVNERCQELELKAQKLKENQMQGGCNHCEIRCFCRRMDANGLISYLIAHVNEHDKLHSELLDALRIASDPAKLVLDVCRYSHESNFNEVLADHHKTSCIILLEMLAKLEPELEPEIKDEARSFAAVWRASLKNINPNVDTYGFLQFLAAYDLAGSYKVEELLSLFKNFYRVPEVYRCEQHMKLCCSLGIVHRMPGLIRSLISSQKRLQAIKYICVFDLDSIFPPGSLLNEHVGFVKQKAKEKLKGGTFKAKGEALDYEHTALVAVLKCISQFTLLSQFQSKHIEQRIKQIEVEMEKRCKGSVAHIEQSTNQINSGNSKHKMAEVNINSQADRQAGKKRIARPSIASVGSPDSQAKRPRIGAAKC*

Click here to download the sequence:
Link to NCBI Protein BLAST