Transcript Information: S_Transcript_90909.p1


Annotated TAIR IDAT1G13220.2
Annotated Gene Namenuclear matrix constituent protein-related
Annotated Gene Symbol(s)LINC2
Annotation TypeHomolog
Chromosome Positionchr1:4515699-4520071 | Forward length=1128
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.881826168141
Replicate 31.3560835355589
Condition 2: 8 Hour
Replicate 12.6343129215282
Replicate 22.6977817477317
Replicate 31.6927290745132
Condition 3: 24 Hour
Replicate 11.9917393770836
Replicate 20
Replicate 32.0771095392449


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_90909.p1 GENE.S_Transcript_90909~~S_Transcript_90909.p1 ORF type:3prime_partial len:340 (+),score=87.30 S_Transcript_90909:327-1343(+)
ATGGAGCAAGTTGCGACGGAATTAAACACAGTAAGGTCAACAATCCACAAACTGAACCAAGTCTTTATCGCTATTAAGTGTCAAGACATAATCTCCATTGATGCTCTCACTCATCAATGGCGGAACTTGTATAACTCCTTCGTACTCGTGGAATCTTCGTTGACGAGTCGTGTGAGCGAAATCGAGTCAAAGGAGAGAGAAATCTTCGTTTTTGCGAAGAGGCTTGAGAATCTGCAAAAATCTGCTGAATTAAGGCAGAAAAGACTGGAATTGAAGGAACGATCTATATGTGAGGCGATTAAAGCAATGGAGATGAGAGAGAAGCAGATAAGAGAGTTTTATGAAGTGATGGAGTTGGAGAAGAATCAGGTTTTTGAACGGTGTAAAGCAGTTGAGTGGAGAGAGAAGGAATTGAGCGATTGTTTCAAATTGCGTACTGAAGAACTTGGATTGAAAGTAGAACAAGTAAGTAAGGAGTTTGAAGCGTTGAGATTGAAGGAAAAGGAGATGAGATTGAAAGAGAAGCAGATGAAGGATCAATGTGATGAACTAGGGTTGAAAGAGAAGGAAGCTGATGAACGTTCACAAAGATTAGAATTGACGGAGAAGAGAATAGATGAGCAGCTTAAGGTGTTGGCGGTGAGTTTAAAAGGGGTGGAGTTGAAAGAGAAGGGAATCGAGGAGCGTGGTAAGGAGATGGAACTGAAAGAGAAGGAGGTCAATGAACGTTTTCGCCTTGTGGAGTTGAAAGAGAAGCAAGCGAATGAGTCTCTTAAATTATTGGTATCGAAAGGTAAACGATTAGATGAGCGGATGGAGTTGAAGGAGAAGGAAGTCAATGAACGTTTTCGAGTTGTGGAATTGAAAGAGAAGCGAGTCAATGCATTGCAATCACGTTGTAAGGAGATTGCATTGAAGGAGAAGGAGGTCGATGAACGTTCTCGAGTTGTGGGAGTGAAGGAGAAGGAAGTCGATGAACGTTCTCGAGTTGTGGGAGTGAAGGAGAAGGAAGTCGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_90909.p1 GENE.S_Transcript_90909~~S_Transcript_90909.p1 ORF type:3prime_partial len:340 (+),score=87.30 S_Transcript_90909:327-1343(+)
MEQVATELNTVRSTIHKLNQVFIAIKCQDIISIDALTHQWRNLYNSFVLVESSLTSRVSEIESKEREIFVFAKRLENLQKSAELRQKRLELKERSICEAIKAMEMREKQIREFYEVMELEKNQVFERCKAVEWREKELSDCFKLRTEELGLKVEQVSKEFEALRLKEKEMRLKEKQMKDQCDELGLKEKEADERSQRLELTEKRIDEQLKVLAVSLKGVELKEKGIEERGKEMELKEKEVNERFRLVELKEKQANESLKLLVSKGKRLDERMELKEKEVNERFRVVELKEKRVNALQSRCKEIALKEKEVDERSRVVGVKEKEVDERSRVVGVKEKEVD

Click here to download the sequence:
Link to NCBI Protein BLAST