Transcript Information: S_Transcript_91190.p1


Annotated TAIR IDAT1G49975.1
Annotated Gene NameINVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18504845-18505431 | Forward length=129
E-Value8.4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.304210723251
Replicate 252.271839874727
Replicate 362.989037085528
Condition 2: 8 Hour
Replicate 162.007673383664
Replicate 272.62246250742
Replicate 375.589274968434
Condition 3: 24 Hour
Replicate 146.04229289556
Replicate 253.695799734731
Replicate 361.308969477051


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_91190.p1 GENE.S_Transcript_91190~~S_Transcript_91190.p1 ORF type:complete len:130 (+),score=26.20 S_Transcript_91190:209-598(+)
ATGGCTCTTGCAAGTTATACTACCAATTTTGCATCAAATAATGCACAGGGATTCCAACACCAACGAAGAAATGTAAGTACTGGAACAAGAAAGTTCACCAATATTACTGGAAGGAGAGGAATTCTCCTATCTTCTACGACGTCGACTATATTACTAGCAGTTGCAGCAACAGATGATGCCATTGATTCCAGGACAGCTCTCCTTCAAAAGTATTTGAAGAAGTCAGAGGAGAATAAGGAAAAGAATGACAAAGAGAGATTGGATAATTACTACAAACGCAATTACAAAGATTACTTTGGATTTGTAGAGGGTACGTTGAGAGCAAAAGAAGAGCAACAACTTTCTGAATCAGAGAAGGGTATTCTTGAATGGTTAGATAAGAATAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_91190.p1 GENE.S_Transcript_91190~~S_Transcript_91190.p1 ORF type:complete len:130 (+),score=26.20 S_Transcript_91190:209-598(+)
MALASYTTNFASNNAQGFQHQRRNVSTGTRKFTNITGRRGILLSSTTSTILLAVAATDDAIDSRTALLQKYLKKSEENKEKNDKERLDNYYKRNYKDYFGFVEGTLRAKEEQQLSESEKGILEWLDKNK*

Click here to download the sequence:
Link to NCBI Protein BLAST