Transcript Information: S_Transcript_91194.p1


Annotated TAIR IDAT1G49975.1
Annotated Gene NameINVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18504845-18505431 | Forward length=129
E-Value9E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.645200494072
Replicate 210.935469606768
Replicate 36.7356079609672
Condition 2: 8 Hour
Replicate 113.351548720292
Replicate 211.283193226993
Replicate 38.1556286488624
Condition 3: 24 Hour
Replicate 18.9279089048515
Replicate 220.693045352317
Replicate 318.64238064726


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_91194.p1 GENE.S_Transcript_91194~~S_Transcript_91194.p1 ORF type:complete len:115 (+),score=20.40 S_Transcript_91194:209-553(+)
ATGGCTCTTGCAAGTTATACTACCAATTTTGCATCAAATAATGCACAGGGATTCCAACACCAACGAAGAAATGTAAGTACTGGAACAAGAAAGTTCACCAATATTACTGGAAGGAGAGGAATTCTCCTATCTTCTACGACGTCGACTATATTACTAGCAGTTGCAGCAACAGATGATGCCATTGATTCCAGGACAGCTCTCCTTCAAAAGTATTTGAAGAAGTCAGAGGAGAATAAGGAAAAGAATGACAAAGAGAGATTGGATAATTACTACAAACGCAATTACAAAGATTACTTTGGATTTGTAGAGGGTACGTTGAGAGAAAGAAGAGCAACAACTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_91194.p1 GENE.S_Transcript_91194~~S_Transcript_91194.p1 ORF type:complete len:115 (+),score=20.40 S_Transcript_91194:209-553(+)
MALASYTTNFASNNAQGFQHQRRNVSTGTRKFTNITGRRGILLSSTTSTILLAVAATDDAIDSRTALLQKYLKKSEENKEKNDKERLDNYYKRNYKDYFGFVEGTLRERRATTF*

Click here to download the sequence:
Link to NCBI Protein BLAST