Transcript Information: S_Transcript_91287.p1


Annotated TAIR IDAT1G20823.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7238880-7239473 | Forward length=197
E-Value6.1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.422209318613
Replicate 215.060252002304
Replicate 313.791959158171
Condition 2: 8 Hour
Replicate 123.087052995505
Replicate 228.986134324515
Replicate 322.798689177502
Condition 3: 24 Hour
Replicate 19.8776864479208
Replicate 27.3903733401133
Replicate 38.4439018225823


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_91287.p1 GENE.S_Transcript_91287~~S_Transcript_91287.p1 ORF type:5prime_partial len:230 (+),score=14.99,zf-RING_2|PF13639.2|2.5e-16,zf-RING_11|PF17123.1|5.3e-12,zf-rbx1|PF12678.3|8.8e-10,zf-C3HC4_2|PF13923.2|1.8e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4|PF00097.21|4.6e-07,zf-C3HC4|PF00097.21|1.3e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|2.8e-06,zf-RING_5|PF14634.2|1.1e+03 S_Transcript_91287:1-690(+)
CTCCTCATCCCCCTTCCCAAATCTCTCCCCCTTTCTCTCTCTCCTCAATCCTTTAAACAACCCATCTCTCCCTCTCCCTCTCCCTCTCCCTCTCATACAACAGATTTTCCGACGATGACTTCTCGAGCTAGATTCCTGAAGAGTGTGACATCGCCGCCTTCAACAGGTGGCGAAGCAGACACAGTAGACTCAGACTTCGTGGTAATACTCGCGGCTCTACTCTGCGCTCTCATATGTGTTCTCGGCCTTGTCGCGGTGGCTCGTTGCGCTTGGCTCCGGAGATTCTCCTCATCGGCGGCGTCTCCTCCGGCGGCTGCTAACAAAGGCTTGAAGAAGAAGGTCCTCAAGTCGCTCCCAAAGGTCGCTTATTCAGTCGAACAGCACGCCGGCAAACTCCCGACCGACGAGTGCGCCATTTGCCTGTCGGAATTCGCCGCCGGTGAGGAGATCCGTGTCCTACCTCAGTGTGGACACAGCTTCCACGTGTCCTGTATTGACACGTGGCTTGGCTCTCACTCTTCCTGTCCTTCTTGCCGTCAGATCCTGGCCGCCGTGGCCCCCACGCGCTGCCAGAAATGCGGTGGTGGTTTGCCCGAGAGTAGTGGTTGCTCTTCCTCTGTTGGAGCTGGACCTGTTGCTGACTCATCGTTGACGTCATCATCCAGGGTTAGGGATAGTTTCTTACCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_91287.p1 GENE.S_Transcript_91287~~S_Transcript_91287.p1 ORF type:5prime_partial len:230 (+),score=14.99,zf-RING_2|PF13639.2|2.5e-16,zf-RING_11|PF17123.1|5.3e-12,zf-rbx1|PF12678.3|8.8e-10,zf-C3HC4_2|PF13923.2|1.8e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4|PF00097.21|4.6e-07,zf-C3HC4|PF00097.21|1.3e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|2.8e-06,zf-RING_5|PF14634.2|1.1e+03 S_Transcript_91287:1-690(+)
LLIPLPKSLPLSLSPQSFKQPISPSPSPSPSHTTDFPTMTSRARFLKSVTSPPSTGGEADTVDSDFVVILAALLCALICVLGLVAVARCAWLRRFSSSAASPPAAANKGLKKKVLKSLPKVAYSVEQHAGKLPTDECAICLSEFAAGEEIRVLPQCGHSFHVSCIDTWLGSHSSCPSCRQILAAVAPTRCQKCGGGLPESSGCSSSVGAGPVADSSLTSSSRVRDSFLP*

Click here to download the sequence:
Link to NCBI Protein BLAST